Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03499 ATGTTGGATTATAGACAAGGTTGGTTATGTATATTTATCTGTGTTTTACCAATTTTTCCTTTGGTGTGTTATTCTGCAAATTTTGTTCCTATAGACAATTACCTTATAGATTGTGGATCACATACAAATACTTCAATAGATAACCTCAATTTCACATCAGATAATTTCTTTCACAATTTCCTTTCAACACAAGAAGATATTCTTGCAAATACTTCTTTAAAATCAGCAACTGATTATTCGCCTCTTTATCAAACTGCAAGAATTTTCAATTCACCTTCAAAGTATACATTTCCTGTTAACAAAAAGGGTCGGCATTGGATCCGTCTTTATTTCTTTCCATTTACATATCAGAATTATAATCTTAGTGCTGCAAATTTTGCTGTTACCACTCAAAACAATGTCCTTCTTAGTAACTTTAGTGTTCCGAATAAAGATCATGTTATGAAGGAGTACTTGGTAAATGTCACCTTAGACACCCTTGAAGTAGTCTTTACCCCGTTGAACAATTCTATAGCTTTTGTTAGTGCAATTGAAGTTGTTTCTGTACCCGATGAGCTGATTGCCGATGATGCTATGGCTTTGAATCCGCGGAGAGAGTATTCAGGATTGTTGACAATGGCACTCGAGACGGTTTTTAGGGTTAACATGGGTGGTCCAAGTGTTTCCTTAGGTGGCGATCCGCTTCATCGAACTTGGGTTCCGGATACAAGCTTTCTTATACAACCTAACCTTGCCAGTAATTTTTCAAGTATTGGTGCTATTAAATATGTAAAAGGGGGTCCAACAGAAAATATTGCTCCACCTAGTGTCTATGGTACTTTAACAGAAATGAACTCGGATAGTGATCCGCGTAGTAATTTCAATGTGACATGGAAGTTTAATGTGGAGCCGGAATTTCAATACCTTGTGCGACTTCACTTCTGTGACATAGTCAGTAAAAGTCTTAATGAACTCTATTTTAATGTTTACATTGATTCCTTGTTGGCTGCCAAGGATCTTGATCTCAGTTTAAAGACTCATAATGTGTTGGCTACTCCgttttttatggattttgttATGGAACCGTCTGTCGACAATAAAATTCTTGTAAGTATTGGCCCTTCTGATGTAAATAATGACTATCCTAATGCCATTTTGAATGGGCTAGAGATAATGAAAATGAACAACTCTAAGAGCAGTCTCAGTGCATCAACAGCCGTGTTTTTGAACAGTAATCATGGTTCAAATTCTAAGAAAGTTGGCATGATAGTCGGTATCAGTCTTGGGATATTTTGTGTGGTGGTGGCTGTGGTTGGAGTTTTCTTTGTACTCttcatgagaagaaaaagacGGTTGGCACAACAAGGGGATTCAAAGACATGGGTTCCTTTATCGATCAACGATGGAACTTCTCACACAATGGGAAGTAAAGATTCCAAAGGCACAGTAACAAGTGCTGCTTCAAACTTCGGGTATCGCTTCCCTTTTGTTGCAGTTCAAGAGGCCACAAATAATTTTGATGAGAGTTGGGTTATTGGTATAGGTGGTTTCGGTAAGGTATACAAAGGTGAATTAAATGATGGAACTAAAGTTGCTTGTAAGAGGGGGAACCCTAGGTCTCACCAGGGACTTGCAGAATTCCGAACCGAAATCGAAATGTTGTCTCAGTTTCGCCATCGCCATTTGGTATCATTGATTGGATATTGCGACGAAAGGAATGAAATGATCTTGATATATGAGTACATGGAGAACGGAACTGTTAAAAGTCATCTGTATGGTTCAGGTCTCCCCAGCTTAAGTTGGAAGGAACGGCTCGAGATATGCATCGGAGCAGCTAGGGGACTTCATTACCTTCATACTGGCTATGCTAAAGCAGTTATTCACCGTGATGTAAAGTCGGCAAATATCTTGCTTGACGAGAATCTCATGGCAAAAGTGGCCGATTTCGGACTATCAAAGACCGGACCGGAAATCGATCAGACACACGTGAGCACAGCTGTCAAAGGGAGTTTTGGTTACCTTGATCCCGAGTATTTCAGAAGGCAACAGTTAACAGAAAAATCAGACGTGTATTCATTTGGGGTAGTTTTGCTTGAGGTTTTGTGTGCGAGACCGGTTATAGACCCATCTCTTCCTAGAGAAATGGTGAACTTGGCAGAATGGGCGATGAAATGGCAGAAAAAAGGGGAACTTGCACGAATCGTAGATCCAACGCTTGCAGGGAAAATCAGACCGGACTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGTTTGGCTGATTTCGGTGTTGATAGGCCTTCGATGGGAGATGTATTGTGGAATTTGGAGTACGCTCTTCAACTGCAAGAGGCTGTTGTTCAAGGCGATCCTGATGAAAACAGTACTAATATGATCGGTGAACTATCtccacaaataaacaatttcgACCATGAATCAGGAGTTTCTGTCGCGCAATTTGAAGCTTCGGGTCTAGATGATCTTTCGGGTGTTtctatgagtaaagtgttctcACAGTTAGTGAAATCTGAGGGAAGATGA 2520 0.3901 MLDYRQGWLCIFICVLPIFPLVCYSANFVPIDNYLIDCGSHTNTSIDNLNFTSDNFFHNFLSTQEDILANTSLKSATDYSPLYQTARIFNSPSKYTFPVNKKGRHWIRLYFFPFTYQNYNLSAANFAVTTQNNVLLSNFSVPNKDHVMKEYLVNVTLDTLEVVFTPLNNSIAFVSAIEVVSVPDELIADDAMALNPRREYSGLLTMALETVFRVNMGGPSVSLGGDPLHRTWVPDTSFLIQPNLASNFSSIGAIKYVKGGPTENIAPPSVYGTLTEMNSDSDPRSNFNVTWKFNVEPEFQYLVRLHFCDIVSKSLNELYFNVYIDSLLAAKDLDLSLKTHNVLATPFFMDFVMEPSVDNKILVSIGPSDVNNDYPNAILNGLEIMKMNNSKSSLSASTAVFLNSNHGSNSKKVGMIVGISLGIFCVVVAVVGVFFVLFMRRKRRLAQQGDSKTWVPLSINDGTSHTMGSKDSKGTVTSAASNFGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVACKRGNPRSHQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMENGTVKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPSLPREMVNLAEWAMKWQKKGELARIVDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPDENSTNMIGELSPQINNFDHESGVSVAQFEASGLDDLSGVSMSKVFSQLVKSEGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03499 839 Gene3D Transferase(Phosphotransferase) domain 1 575 792 - -
Tsu02g03499 839 SMART serkin_6 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03499 839 Pfam Malectin-like domain 36 387 IPR024788 -
Tsu02g03499 839 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 21 832 - -
Tsu02g03499 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Tsu02g03499 839 Pfam Protein tyrosine and serine/threonine kinase 504 696 IPR001245 GO:0004672|GO:0006468
Tsu02g03499 839 PANTHER OS07G0166700 PROTEIN 21 832 IPR045272 GO:0004714|GO:0006468
Tsu02g03499 839 CDD STKc_IRAK 505 770 - -
Tsu02g03499 839 Gene3D Phosphorylase Kinase; domain 1 461 574 - -
Tsu02g03499 839 Gene3D - 33 182 - -
Tsu02g03499 839 Gene3D - 206 389 - -
Tsu02g03499 839 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Tsu02g03499 839 SUPERFAMILY Protein kinase-like (PK-like) 478 770 IPR011009 -
Tsu02g03499 839 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03499 Tsu-Chr2 39198801 39201474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03499 12 839 Receptor kinase-like Gene Family AT3G46290 64.910 0.0 1071
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tsu02g03499 Malectin_like 3e-43 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03499 - - gmx:100806488 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03499 02 39198801 39201474 Tsu02g03499 02 39198801 39201474 ECH
Tsu02g05146 02 60518443 60521885 Tsu02g03499 02 39198801 39201474 ECH
Tsu02g05146 02 60518443 60521885 Tsu02g03499 02 39198801 39201474 PCT