Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03487 ATGCCTAGAAAGGGAATGAGAAGCATTTTCTTCCAACCATCCACGTCATCAAAACTCCCACCACAATCCTCACCTCTTCGCACTTTCTCAGACTCCTTAATGGAAGAAAACATAGAAAACGCAGAATCACTTATAACAAAATGGGATTATTCCAAAAGAATAATTACCCCTCTTTTCAGTGGTAACACTCGTTTAGAAGCCAAACAGTACTTAAACGCTGTTAAAGGTCTACAATCCGCTATGCAATACCTTGTCACACGTGATTCCACCTCTAACTCTCTTATAAAAGCTCAATTCTTAATGCAACTTGCAATGAAAACTCTTCAAAAAGAGTTTTACCAAATTCTATCATCAAACAGAGAACATTTAGATCCTGAAACCGTTTCTAACCGTTCCTCAAGCGTTTCATTTTCAGATTATGATAGCGAAATCGAAATTTCCGACGACGAGTTTCGTGTCGCCGGAAATACCATTTCTGAAACGGAGAGAGTTTCTATGCTTGCTATGGCGGATTTGAAAGCTATTGCTGATTGTATGATATCTTCTGGTTATggaaaagagtgtgttaagGTTTATATTGTTATGAGAAAATCGATTGTTGATGAAGCGCTTTATCATCTCGGTGTTGAACGGTTAAGTTATTCTCAGATTCAGAAAATGGATTGGGAAGTTATTGAGTTGAAAATCAAGACATGGTTAAACGCCGTTAAAGTTGCCGTTGGAACTCTGTTTCACGGCGAGAGGATTCTCTGTGACGACGTGTTTGCAGCGGCCGGGAAGAGAATCGCTGAATCATGTTTCGCGGAGATTACTAAAGAAGGTGctatttcacttttcacttTCCCGGAAATGGTGGGAAAATGCAAGAAAACGCCGGAGAAAATGTTTAGAACACTTGATTTATACGAAGCAATTTCCGATCATTTAccacaaattcaatcaattttctCGTTTGATTCAACCGCCAACGTCCGTTTACAAGCCGTTACATCTATGGTAAAACTCGCTGAAGCCGTTAAAACAATGTTAACCGATTTCGAATCCGCGATTCAGAAAGATTCTTCAAAGAAACCAATCACCGGCGGTGGAGTTCACCCGCTCACGCGCTATGTAATGAACTACATCACTTTCCTCGCTGATTACAGCGGCGTGCTCTCCGATATCGTTTTTGATTTGCCGCAATCACCGTTACCGGAATCTTACTATCAAAGCCCTATGAGAAATGAAAACAATTCATCTTCCGATATATCGGAGAAAATCGCGTGGTTGATACTCGTTCTTCTCTGTAAACTTGACGGAAAAGCAGAACTATACAAAGACGTAGCACTTTCTTATCTTTTTCTTGCGAATAACATGCAATACGTCGTCGTAAAGGTTCGAAGATCAAATTTAGGGTTTCTTCTTGGAGAAGATTGGTTAACGAATCATGAATTGAAGGTTAGAGAGTACGTGTCAAAGTTCGTGCGCGTTGGATGGAATAAAGTGTTATCGACGTTGCCGGAAAATTCGACGGTGGATATGCCGGTGGAGAAGGTTAGAGAGAGTTTTGTGAAATTCAACGCTGGTTTTGATGAAGAGTGTAGGAAACAATCTTCGTGGGTTGTAACCGACCCGAAACTGAGAGATGAAATCAAGGGCGCGATAGGTTCGAAGTTGGTGGGAAAGTATAGTGGGTTTTATGAGATGAACCGGGTCGGGTTGGATTCGGTTATTAGATATAAACCGGAAAATATAGAGGGTTGTTTGTGTAATATTTTGTATGGAGTTGGAGATTCGGGTAGTGTTTCGTCACATTCTTCGTCATCTTCTCGTGGCTCTAGTCGCCGGTGA 1830 0.3995 MPRKGMRSIFFQPSTSSKLPPQSSPLRTFSDSLMEENIENAESLITKWDYSKRIITPLFSGNTRLEAKQYLNAVKGLQSAMQYLVTRDSTSNSLIKAQFLMQLAMKTLQKEFYQILSSNREHLDPETVSNRSSSVSFSDYDSEIEISDDEFRVAGNTISETERVSMLAMADLKAIADCMISSGYGKECVKVYIVMRKSIVDEALYHLGVERLSYSQIQKMDWEVIELKIKTWLNAVKVAVGTLFHGERILCDDVFAAAGKRIAESCFAEITKEGAISLFTFPEMVGKCKKTPEKMFRTLDLYEAISDHLPQIQSIFSFDSTANVRLQAVTSMVKLAEAVKTMLTDFESAIQKDSSKKPITGGGVHPLTRYVMNYITFLADYSGVLSDIVFDLPQSPLPESYYQSPMRNENNSSSDISEKIAWLILVLLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRRSNLGFLLGEDWLTNHELKVREYVSKFVRVGWNKVLSTLPENSTVDMPVEKVRESFVKFNAGFDEECRKQSSWVVTDPKLRDEIKGAIGSKLVGKYSGFYEMNRVGLDSVIRYKPENIEGCLCNILYGVGDSGSVSSHSSSSSRGSSRR 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03487 609 MobiDBLite consensus disorder prediction 1 24 - -
Tsu02g03487 609 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 592 - -
Tsu02g03487 609 MobiDBLite consensus disorder prediction 9 24 - -
Tsu02g03487 609 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 592 IPR004140 GO:0000145|GO:0006887
Tsu02g03487 609 Gene3D Exocyst complex component Exo70 43 591 - -
Tsu02g03487 609 Pfam Exo70 exocyst complex subunit 231 582 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tsu02g03487 609 SUPERFAMILY Cullin repeat-like 47 583 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03487 Tsu-Chr2 39036649 39038615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03487 20 588 EXO70 exocyst subunit family AT5G59730 49.416 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03487 K07195 - gmx:100810579 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03487 02 39036649 39038615 Tsu02g03487 02 39036649 39038615 ECH