Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03483 ATGTCTGTCCCTTCTTTATTTCTATTcactttttctttgtttgttttcttcattttgaCAGAAAATTCATCATGCTTAGCAATATTTAGTAGCAACATTACACGCATTACTCGCCAGCTTAGAGTTGATTACTATGCTAAATCTTGTCCACAATTAGAACAGCTTGTTGGTTCAGTCACTTCTCAACAATTCAAACAATCACCTGTTTCTGGACCTGCCACCATTCGTCTCCTTTTCCATGATTGTTTTGTAGAAGGTTGTGATGCATCAATTTTAATAGCATCAAAGCCAGGGAGCAAGGAATTAGCAGAGAAAGATGCAGAGGATAATAAAGATTTGAGGGTGGAAGGTTTTGAGACTATAAAGATGGCCAAGGAAGTGGTGGAGAAAAAGTGTCCTAATGTAGTTTCTTGTGCAGACATTCTTGCAATTGCAGCCAGAGATTTTGTGCACCTTGCAGGGGGACCCTATTATCAAGTAAAGAAGGGAAGATGGGATGGAAAGATATCAATGGCATCAAGGGTAGGGTCCAACATCCCTCGTGCAAACGCAACCGTTGATGAGCTTATCAAACTTTTCGGCTCGAAAGGCTTAACCACACAGGACATGGTTGCACTTTCCGGGGCTCATACAACTGGGTTTGCTCATTGCAAGAACTTTGTGAGCCGCCTCTACAATTACCGGGGCAAGGGTCAACCCGATCCGGATATGAACCCTAAACTATTGCAAGCTCTTAGAATGTACTGTCCAAATTTTGGTGGAAACTCAGATATTGTTGCACCATTTGATGCCACTACTCCTTTCATATTTGACCATGCATATTATGCTAACTTGCAGAGCAAGATGGGTTTGTTAGCATCCGACCAGGCTTTGGCTTTGGACCCGCGAACCAAGTCACTGGTTCAATATTTTGCAAAGGATAAGCAGAAGTTTTTTCAAGCTTTTGTAGCTGCTATAGACAAAATGAGTTTAGTGAAAGTTGTGAGAGGGAAAAGGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTGA 1035 0.4077 MSVPSLFLFTFSLFVFFILTENSSCLAIFSSNITRITRQLRVDYYAKSCPQLEQLVGSVTSQQFKQSPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNKDLRVEGFETIKMAKEVVEKKCPNVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANATVDELIKLFGSKGLTTQDMVALSGAHTTGFAHCKNFVSRLYNYRGKGQPDPDMNPKLLQALRMYCPNFGGNSDIVAPFDATTPFIFDHAYYANLQSKMGLLASDQALALDPRTKSLVQYFAKDKQKFFQAFVAAIDKMSLVKVVRGKRHGEKRRDCSMHM 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03483 344 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Tsu02g03483 344 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Plant peroxidase signature 277 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Plant peroxidase signature 317 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Plant peroxidase signature 261 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 ProSiteProfiles Plant heme peroxidase family profile. 39 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 SUPERFAMILY Heme-dependent peroxidases 39 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 CDD secretory_peroxidase 39 341 IPR033905 GO:0004601|GO:0042744
Tsu02g03483 344 PANTHER PEROXIDASE 25-RELATED 29 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 Gene3D Peroxidase, domain 2 180 322 - -
Tsu02g03483 344 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu02g03483 344 PANTHER PEROXIDASE 19 29 340 - -
Tsu02g03483 344 Gene3D - 43 342 - -
Tsu02g03483 344 Pfam Peroxidase 59 307 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03483 Tsu-Chr2 39011636 39014388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03483 1 344 Peroxidase AT2G34060 60.694 1.10e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03483 K00430 - gmx:100777463 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03483 02 39011636 39014388 Tsu02g03483 02 39011636 39014388 ECH