Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03464 ATGAAGATATTACACCAACAATCTGTTTTGTACTACTTTTCCATCCTCTTATTCATTGTTACTGTTAATGGAGACAATGAGGAAGATTACATGTCCCAACTTTTGAAAACACTGACCACAACTCCCACAGACTGGTCTAACAACACTCACTACTGCAACTGGACAGGCATATCTTGTGACTCTACTCAATCTGTTACCTCTATCAAGCTCCCATCAAGTTCACTCACTGGATCACTCCCTCCCTATCTCAACAGTACTCTCATTAATCTCATCCACATCGATCTCCACAACAACTCACTCAATGGTCCTTTGCCTTATTTTAGTAACCTCTTATTGCTCCAAACTGTGTCCCTTGGTCACAATAACTTCTCCTTCGTCCTAGAAAGTTGCTTTTATCCCACACCTGATTTGAGAACCCTCAACCTTAGCAACAACTTGAATCTCCCCAATTGGATATTTCCTTTGGCTGATTTGGGTAACTCCATATATTTGGACACCTTGGATCTCGAGGCTACGAATATGATAGGCCCATTAGATCCGGAAACATTCATTTGGTTTGAAAATTtgcatactttttttatttctcacaACAAATTAGATGGAAATTTACCCCAATCTCTCGGGAACTCTGCAGTAAGGTATTTACGGcttaacaacaacaaattcaCGGGTACAATTTCTGTTATATCAACCATGAGTAATTTGTCTCAAGCGTGGCTTCACAATAACATGTTCACGGGTCGAATTCCCAACATGTCCAATTGTACTAATTTGTCTGATTTGCAGCTTCAGTCAAATTCCTTAATTGGTTTGATCCCACCTTCCTTGCTTGCTTTATCTAGCTTGAGCATCATCTCTTTGGGTAACAATGGGCTTCACGGACCAATACCTGTGTTTCACAAGGGTGTTAAAGCAACTTTGGAACCAAATAACTTTTGTCGAAGCAATGTTGGACCTTGTGATCCCCAGGTTATGATTTTGCTTGAAATTTTTGAAGCTTTTGATCCTTATTATGTTTTGTCAATTAATGGGAACGATGCTTGTACCGGAGGGAAATGGACCAATATATCAACCGACCTGGTCTTGATTAGGTGTGAAAGAGGAAAAATTGTTGATTTTAAGATCTCGAATGCTGGTATAACAGGAACCATCTCTCCTACTTTTTCCAATTTAACAAGTTTGGTGAACTTAAATCTTTCTAACAATTCTTTGACGGATTCAATACCAATCAGTCTTACAACTTTGCTTGAACTTCAGCTTCTCGATGTTTCTAATAATAATCTATCAGGACCAATTCCCAAATTTTTATCCAAGAAGGTTAAGTTCAATACAACTGGGAATGCTTTGCTTGGCCAAACTGGAGGTTCATCTAAAGCAAACCTTAGACTTGTAATTTGGATTGCAGGGGCTTCCTTGATAAGTGTTGGGTTTGTTATATTTATCGTGATTATTTGTAAACGGAAGAGATATGTAGAAGTGAAAAGAATGACAAATTCATTCCGCGATAAATTAGGTCAAGGAGGATATGGTGTTGTGTACAAAGCAAGCTTACCTGATGGTCGTCAAGTGGCGGTGAAAATTATAAATGACTCAAAGGGAAATGGAGAAGAATTCATAAATGAAGTTGCTAGCATTAGTAGAACGTCACATGTGAACATCGTAGCACTTTTGGGTTTTTGTTATGAGAACAAAAAAGCACTAATATATGAATTCATGCCCAAAGGATCATTAGATAACTTCATCTGTAAAAGTGGATTTCCTGATGTTAGTTGTAATTTGGATTGGAAAACAATGTACCAAATTGCAATCGGCATTGCTCGAGGTCTAGAATACTTGCATCAAGGATGCATTTCAAGAATTTTGCATCTTGATATCAAACCCCAAAACATTCTTTTGGATGAagatttttgtccaaaaatcTCTGATTTTGGACTGGCtaaaatatgccaaagaaaggaTAGTGTTGTTTCCATGTTGGGCACAAGAGGAACAATTGGATTCATAGCACCAGAAGTATTTAGCCGAACATATGGTGGAGTTTCTCACAAGTCTGATGTATACAGTTATGGCATGTTAATCATAGAAATGATTGGAGGAAGAAAGAATTATGACCCAGGAGGGTCATGTACTTCTGAGATGTTCTTTTTAGACTGGATTTATAAGGATCTCGAGCTAAGTAATAACTTTGTAAATTGTTTATCAAATTCAGAGGAAGAAAACGATACAGTGAGAAAGATTACCTTGGTTAGTCTATGGTGCATTCAAACAAATCCATCAGATAGACCATCAATGAGTAAAGTATTAGAAATGCTACAAGGGCCACTAGAGTCAGTGCCATATCCTCCAAAGCCTTTCTTATATTCATCTGAAATGCCATCACTACAAATTTCATATGAGTCTTCCAACAATTTGTTAGAGACAAATTCAATACCTTAA 2436 0.3654 MKILHQQSVLYYFSILLFIVTVNGDNEEDYMSQLLKTLTTTPTDWSNNTHYCNWTGISCDSTQSVTSIKLPSSSLTGSLPPYLNSTLINLIHIDLHNNSLNGPLPYFSNLLLLQTVSLGHNNFSFVLESCFYPTPDLRTLNLSNNLNLPNWIFPLADLGNSIYLDTLDLEATNMIGPLDPETFIWFENLHTFFISHNKLDGNLPQSLGNSAVRYLRLNNNKFTGTISVISTMSNLSQAWLHNNMFTGRIPNMSNCTNLSDLQLQSNSLIGLIPPSLLALSSLSIISLGNNGLHGPIPVFHKGVKATLEPNNFCRSNVGPCDPQVMILLEIFEAFDPYYVLSINGNDACTGGKWTNISTDLVLIRCERGKIVDFKISNAGITGTISPTFSNLTSLVNLNLSNNSLTDSIPISLTTLLELQLLDVSNNNLSGPIPKFLSKKVKFNTTGNALLGQTGGSSKANLRLVIWIAGASLISVGFVIFIVIICKRKRYVEVKRMTNSFRDKLGQGGYGVVYKASLPDGRQVAVKIINDSKGNGEEFINEVASISRTSHVNIVALLGFCYENKKALIYEFMPKGSLDNFICKSGFPDVSCNLDWKTMYQIAIGIARGLEYLHQGCISRILHLDIKPQNILLDEDFCPKISDFGLAKICQRKDSVVSMLGTRGTIGFIAPEVFSRTYGGVSHKSDVYSYGMLIIEMIGGRKNYDPGGSCTSEMFFLDWIYKDLELSNNFVNCLSNSEEENDTVRKITLVSLWCIQTNPSDRPSMSKVLEMLQGPLESVPYPPKPFLYSSEMPSLQISYESSNNLLETNSIP 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03464 811 Gene3D Ribonuclease Inhibitor 25 320 IPR032675 -
Tsu02g03464 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Tsu02g03464 811 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Tsu02g03464 811 Gene3D Ribonuclease Inhibitor 327 453 IPR032675 -
Tsu02g03464 811 PANTHER RUST RESISTANCE KINASE LR10-RELATED 486 810 IPR045874 GO:0004672
Tsu02g03464 811 SMART serkin_6 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03464 811 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 489 IPR045874 GO:0004672
Tsu02g03464 811 SUPERFAMILY Protein kinase-like (PK-like) 489 802 IPR011009 -
Tsu02g03464 811 PANTHER TYROSINE KINASE FAMILY PROTEIN 20 489 - -
Tsu02g03464 811 PANTHER TYROSINE KINASE FAMILY PROTEIN 486 810 - -
Tsu02g03464 811 Gene3D Phosphorylase Kinase; domain 1 482 571 - -
Tsu02g03464 811 Gene3D Transferase(Phosphotransferase) domain 1 572 778 - -
Tsu02g03464 811 ProSiteProfiles Protein kinase domain profile. 498 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03464 811 SUPERFAMILY L domain-like 44 435 - -
Tsu02g03464 811 Pfam Protein kinase domain 502 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03464 811 Pfam Leucine rich repeat N-terminal domain 35 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03464 Tsu-Chr2 38791007 38795151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03464 479 809 Receptor kinase-like Gene Family AT4G18250 55.908 2.29e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu02g03464 Pkinase 8.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03464 - - cam:101489592 978.008