Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03459 ATGGGGATCGAGAATATTCCTGCAACCCTTAGCCATGGTGGTAGGTTCATTCAATACAACATATTCGGTAACATGTTTGAAGTTACTGCTAAATACAAACCACCCATTATGCCAATCGGTAAAGGTGCTTATGGTATTGTTTGCTCTGCTCATAATTCTGAGACAAATGAACATGTTGCCATCAAGAAGATTGCAAATGCTTTTGATAACAAAATTGATGCCAAGAGAACTCTCCGTGAAATCAAACTGCTTCGTCATATGGATCATGAAAACGTGGTCGCAATCAGGGATATAATACCACCACCTCAGAGGGAGGTATTCAATGATGTTTACATTGCATATGAGCTAATGGACACTGATCTTCACCAAATCATTCGATCAAACCAAGCACTATCGGAGGAGCACTGTCagtaTTTTCTGTACCAAATCCTTCGTGGGTTGAAGTACATACATTCTGCGAATGTTCTGCATAGGGACTTAAAACCAAGCAACCTTCTCCTAAACGCCAACTGCGACTTAAAGATTTGTGATTTTGGACTGGCCCGTGTAACCTCCGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCGGAGCTTCTGTTAAACTCTTCTGATTATACAGCAGCAATTGATGTATGGTCTGTTGGCTGTATTTTCATGGAACTGATGGATCGAAAGCCTTTGTTTCCTGGCAGAGATCATGTGCATCAGTTGCGTCTACTCATGGAGTTGATTGGTACCCCAACAGAAGCTGATTTGGGGTTTCTGAATGAAAATGCTAAGAGATACATTAGGCAACTACCTCCTTACCACCGCCAATCTTTCCTAGAAAAGTTTCCGCATGTCCATCCTGAAGCTATAGATCTTGTTGAAAAAATGTTAACTTTTGatccaagaaaaagaattacTGTGGAAGATGCATTGGCACACCCCTACTTAACATCTCTGCATGACATCAGTGATGAACCTTGTAGTAGTGAGATAATGATGGTTAGTTGGGAAGCCGATGGCAAGTTGTTCCCTTCCTTCACAAGTTTTTGCTTGTGTATTTATCTTCTTCACTTTGTTGCTATTTTAGAGCCGCGTATTAGTGATGCTCATTCGGATCAAGTCTTCCAATGCAATGGTCTTTTAGGTGTTGAGAAATAG 1164 0.4021 MGIENIPATLSHGGRFIQYNIFGNMFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPTEADLGFLNENAKRYIRQLPPYHRQSFLEKFPHVHPEAIDLVEKMLTFDPRKRITVEDALAHPYLTSLHDISDEPCSSEIMMVSWEADGKLFPSFTSFCLCIYLLHFVAILEPRISDAHSDQVFQCNGLLGVEK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03459 387 SUPERFAMILY Protein kinase-like (PK-like) 38 326 IPR011009 -
Tsu02g03459 387 ProSitePatterns MAP kinase signature. 68 171 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu02g03459 387 Gene3D Transferase(Phosphotransferase) domain 1 117 332 - -
Tsu02g03459 387 SMART serkin_6 33 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03459 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Tsu02g03459 387 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 331 - -
Tsu02g03459 387 ProSitePatterns Protein kinases ATP-binding region signature. 39 63 IPR017441 GO:0005524
Tsu02g03459 387 Pfam Protein kinase domain 38 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03459 387 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 331 - -
Tsu02g03459 387 ProSiteProfiles Protein kinase domain profile. 33 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03459 387 Gene3D Phosphorylase Kinase; domain 1 16 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03459 Tsu-Chr2 38733257 38738860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03459 2 328 MAP Kinase Gene Family AT2G43790 93.272 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu02g03459 Pkinase 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03459 K14512 - gmx:100805830 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03459 02 38733257 38738860 Tsu02g03459 02 38733257 38738860 ECH
Tsu08g03927 08 57592235 57596145 Tsu02g03459 02 38733257 38738860 ECH