Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03449 ATGGGAAAGAAGGGGAGTTGGTTTTCAGCAATAAAGAGGGTTTTCACACACCACTCCAAGGGCAAGCAGGATTCAGATAACAAAAGtacaaaagagaagaagaaaggtttAGGAAAACTAAAGCATGGAGAGAGCAATTCTTTCATCCCTATCTTTAGAGAGCCAAGCAGCATTGAAAAAATATTCGGTGACTTCGAAAGAGAGCAACAAGTACTTACAATTAGGCCTCCCACACCTCCTGAGAGACCGAAAACGCCACCTTTTGTACCTCCTAGAGTTGCTTCTCCTAGGCCTCCTTCTCCAAAGCCTCCTTCTCCAAGGGCTCCATCTCCGAGAGCTGCTTCTCCCCGAGTTACCTCTCCGAAAGCTGCGTCCTCCCGGAATGTTCATCAACACAAGGAGGTTCGAAACAGACCAGAACCGACTTTACAAAACCAGAATACCTCGGCTACTAAGATCCAGGCTGCTTACAGAGGTTATACGGGCCGGAGGAGTTTTAGAGCTCTAAAGGGTTTGGTAAGACTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGACAGACAGTTAGTGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAATCTCGACGAATTCAGATGTTGGAAAACCAGGCACGATATCAAGCCGAGTTCAAGAATGATAAGGACACTGGAAGTACCTTTGGCAAACTGATTTCTGAGGCAGGTAACGGTGAAGATTGGGATGATAGCTTACTGACAAAAGAGGAAGTAGATGCGAGGTTGCAGAAGAAGGTTGAAGCGATCATCAAAAGAGAAAGACAAATGGCATTTGCATATTCACATCAGTTGTGGAAGGGGACTCCAAAATCAACTCAAACGCAGGCGACAGATATGCGAGCGAGCGGATTCCCATGGTGGTGGAACTGGTTGGAAAGACAACTACCTACAGTAGCAAATCCACAAGAAAAACAAGTCCTAAAGAGTTTTCAACTCACACCACCAAGACCATATTCAGAACAAAAGACAAGTCCAAGACCTGGCTCAAGCTCTCAAAGGCCTTTCGCCTTTGATAACATGGATACACCAACTCCAAAATCAACAAGATCAACTATATTTCCATCTTCAAAACCATCTAGAACTCCACCATTTAGAACTCCACAAGGAAACAGTTCAAGCATGATGTCAAAACATTCAAGGCCAAGAGCAGTAGGATCCAGTTCACCTTTCGACGTACCACTAAAGGATGACGATAGTCTCATGAGCTGTCCACCGTTTTCGGTTCCAAACTACATGACTCCAACTGTTTCTGCTAAGGCTAAAGTACGCGCTAATAGTAATCCAAGAGAAAGGTTCGGTGGTGGTAGTAGTGGTTGTGTAACTCCAACTCCAAGCAATGATTCGAGGAGAAGTTCATTCCCTTTGTCACAAGGTATAGGATCATTCAAATGGAATAAAGGGTCATTGTTCTCTAGCAATAAGGATCGTCATGGCTCTCAATCCTCTCATAGGACACCAGATAAATATCAGTCACTTGAATCTATAGGAAATGTGAGCGTGGATTCGACAGTATCGTTGCCGGCAAGAGTTGGAAGGAAGCCTTTTACAAGATTTGTGtga 1614 0.438 MGKKGSWFSAIKRVFTHHSKGKQDSDNKSTKEKKKGLGKLKHGESNSFIPIFREPSSIEKIFGDFEREQQVLTIRPPTPPERPKTPPFVPPRVASPRPPSPKPPSPRAPSPRAASPRVTSPKAASSRNVHQHKEVRNRPEPTLQNQNTSATKIQAAYRGYTGRRSFRALKGLVRLQGVVRGQNVKRQTVSAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDTGSTFGKLISEAGNGEDWDDSLLTKEEVDARLQKKVEAIIKRERQMAFAYSHQLWKGTPKSTQTQATDMRASGFPWWWNWLERQLPTVANPQEKQVLKSFQLTPPRPYSEQKTSPRPGSSSQRPFAFDNMDTPTPKSTRSTIFPSSKPSRTPPFRTPQGNSSSMMSKHSRPRAVGSSSPFDVPLKDDDSLMSCPPFSVPNYMTPTVSAKAKVRANSNPRERFGGGSSGCVTPTPSNDSRRSSFPLSQGIGSFKWNKGSLFSSNKDRHGSQSSHRTPDKYQSLESIGNVSVDSTVSLPARVGRKPFTRFV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03449 537 MobiDBLite consensus disorder prediction 17 41 - -
Tsu02g03449 537 MobiDBLite consensus disorder prediction 437 472 - -
Tsu02g03449 537 PANTHER IQ-DOMAIN 5-RELATED 1 534 - -
Tsu02g03449 537 MobiDBLite consensus disorder prediction 328 414 - -
Tsu02g03449 537 MobiDBLite consensus disorder prediction 1 151 - -
Tsu02g03449 537 MobiDBLite consensus disorder prediction 328 401 - -
Tsu02g03449 537 Pfam IQ calmodulin-binding motif 149 167 IPR000048 GO:0005515
Tsu02g03449 537 MobiDBLite consensus disorder prediction 456 472 - -
Tsu02g03449 537 Gene3D - 126 166 - -
Tsu02g03449 537 ProSiteProfiles IQ motif profile. 146 174 IPR000048 GO:0005515
Tsu02g03449 537 Pfam Protein of unknown function (DUF4005) 395 502 IPR025064 -
Tsu02g03449 537 MobiDBLite consensus disorder prediction 488 512 - -
Tsu02g03449 537 MobiDBLite consensus disorder prediction 76 111 - -
Tsu02g03449 537 PANTHER IQ-DOMAIN 13 1 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03449 Tsu-Chr2 38629901 38634517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03449 1 537 IQD Protein Family AT3G59690 53.521 7.22e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03449 - - gmx:100807777 740.725