Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03403 ATGATTGCATATTATCTAACCactttttattttctcattcaGAATTTTTTGTACACTTCAAAGGATGAAAGTTCCGAGTTAAAAGCTATAGACTTTGGGTTATCAGATTTTGTCAGACCAGATGAAAGGCTTAATGACATTGTTGGAAGTGCGTATTATGTGGCTCCTGAAGTTCTTCATAGATCTTACAGCACAGAGGCTGATGTGTGGAGTATAGGTGTGATAGCATATATTCTATTATGTGGTAGTCGTCCATTTTGGGCTCGAACAGAGTCGGGTATTTTTAGGGCAGTTTTGAAAGCTGATCCAGGCTTTGACGAAGCTCCCTGGCCATCCTTATCTTCAGAAGCAAAAGATTTTGTCCAACGCCTACTGAATAAGGACCCTCGGAAGCGAATATCTGCTGCTCAGGCTCTGAGTCATCCTTGGATACGTAATTACAACGATGTTAAAGTTCCGCTTGATATCTTAATATTTAAACTCATGAAGACTTATATGAGATCATCATCCTTGCGTAAGGCTGCCTTAAGGGCCTTATCGAAGACATTAACTGCTGACGAGCTCTATTATCTGAGGGAACAATTTGCACTGTTGGAACCAAGCAAAAATGGGAGCATATCCTTGGAGAACATTAACAAGGCCTTGAAGAAATATGCAACAGATGCCATGAAAGAGTCTCGTATCACAGATTTTCTTTCCTCGCTGAGTTCATTACAATATAGAAGGATGGATTTTGAAGAATTTTGTGCTGCTGCATTAAGTGTGCACCAACTCGAAGCTCTTGATCGTTGGGAACAACATGCCCGTTGCGCATATGAACTTTTTGAGAAAGATGGAAACAGGGCTATTGTCATTGAAGAACTTGCTTCGGAACTTGGACTTGGTCCTTCTATCCCTGTTCATGTTGTTCTTCATGACTGGATACGCCACACCGATGGGAAGTTAAGCTTTCTCGGGTTTGTCAAATTATTGCACGGTGTATCTAGCCGAAGCCTTCCAAAGGTCCAGTTATGA 1014 0.4073 MIAYYLTTFYFLIQNFLYTSKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFDEAPWPSLSSEAKDFVQRLLNKDPRKRISAAQALSHPWIRNYNDVKVPLDILIFKLMKTYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISLENINKALKKYATDAMKESRITDFLSSLSSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRSLPKVQL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03403 337 Gene3D Transferase(Phosphotransferase) domain 1 13 156 - -
Tsu02g03403 337 SUPERFAMILY EF-hand 175 325 IPR011992 -
Tsu02g03403 337 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03403 337 PANTHER CDPK-RELATED KINASE 2 14 331 - -
Tsu02g03403 337 Gene3D - 162 253 - -
Tsu02g03403 337 SUPERFAMILY Protein kinase-like (PK-like) 14 170 IPR011009 -
Tsu02g03403 337 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 331 - -
Tsu02g03403 337 SMART serkin_6 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03403 337 Pfam Protein kinase domain 14 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03403 337 Gene3D - 169 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03403 Tsu-Chr2 38067865 38069820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03403 14 332 EF-hand Containing Proteins AT3G50530 77.143 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tsu02g03403 Pkinase 2.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03403 - K00924 lja:Lj4g3v0575040.2 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03403 02 38067865 38069820 Tsu02g03403 02 38067865 38069820 ECH