Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03371 atggTTGCCTTGTTAACAGCTCCAGGTTGCAGTGCTTCAACACTAACATCCGGTGGATGTGGAAGTGCAACTAAAATCAGCGTTATAGTCGCAGGCGACTTGGTTGAGAAAACATACCAGAGTAAAGACACAAAATCTTTCTCTGATAAACAGAGGTTGGGAACCGAGTCATTCGGTGTCTATTCCGGAAAACTTCACAATAATGAGTTTGTTGCAATAAAGAAGATAAGGCATAGAGATACAAACAGTGTTGATCAAGTCATGAATGAGGTCAAGCTCCTTTCTTCGGCGAGTCACCCAAATTTGGTTCGCCTCCTAGGTTGCTGCATTGAGGAGGGAGAGCAGATACTTGTTTATGAATATATGCCAAATGGAACGTTGTCTGAGCATTTGCAAAGAGAGAGAGGGAAAGGTCTTCCATGGACAATACGACTCACCATTGCTTCTGAAACCGCTAATGCTATAGCTTATCTCCGGTCTTCAATTCATCCCCCAATTTACCACAGAGATATAAAATCTAGTAATATACTATTGGATTACAACTACAAATCTGAAGTGGCTGATTTTGGACTTTCTAGGCTTGGCATGATAGAGACATCACATATTTCAACTGTTCCACTGGGTACTCCAGACTATGTCGATCCTCAATACCACCAGAACTTCCATCTTGTGATGTATACAACTTTGGAGTGGTTTTGGTAG 702 0.4145 MVALLTAPGCSASTLTSGGCGSATKISVIVAGDLVEKTYQSKDTKSFSDKQRLGTESFGVYSGKLHNNEFVAIKKIRHRDTNSVDQVMNEVKLLSSASHPNLVRLLGCCIEEGEQILVYEYMPNGTLSEHLQRERGKGLPWTIRLTIASETANAIAYLRSSIHPPIYHRDIKSSNILLDYNYKSEVADFGLSRLGMIETSHISTVPLGTPDYVDPQYHQNFHLVMYTTLEWFW 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03371 233 Gene3D Transferase(Phosphotransferase) domain 1 122 228 - -
Tsu02g03371 233 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 42 223 IPR045274 GO:0007166
Tsu02g03371 233 ProSiteProfiles Protein kinase domain profile. 47 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03371 233 Pfam Protein kinase domain 48 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03371 233 Gene3D Phosphorylase Kinase; domain 1 26 121 - -
Tsu02g03371 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Tsu02g03371 233 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 42 223 - -
Tsu02g03371 233 SMART serkin_6 47 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03371 233 SUPERFAMILY Protein kinase-like (PK-like) 37 221 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03371 Tsu-Chr2 37775114 37776214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03371 42 223 Receptor kinase-like Gene Family AT2G23450 74.317 2.12e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tsu02g03371 Pkinase 7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03371 - - gmx:100779130 317.775