Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03367 ATGAATGAGATCAAGCTCCTTTCTTCGGTGAGTCACCCAAATTTGGTTCGCCTCCTAGGTTGCTGCATTGAGGAGGGAGAGCAGATACTGGTTTATGAATATATGCCAAATGGAACGTTGTCTGAGCATTTGCAAAGAGAGAGAGGTAAAGGTCTTCCATGGACAATAAGACTCACCATTGCTTCTGAAACTACTAATGCTATAGCTTATCTCCAGTCTTCAATTCATCCCCCAATTTACCACAGAGATATAAAATCCAGTAATATACTATTGGATTATAACTACAAATCTAAAGTAGCTGATTTTGGACTTTCTAGGCTTGGCATGATAGAGACATCACATATTTCAACTGCTCCACAGGGTACTCCAGGTTATGTTGATCCTCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTATACAGCTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCATGAAAGTGGTTGATTTTGCCAGACCTCAAAGTGAGGTTAATTTAGCTGCACTTGCTGTTGATAGGATTAGGAGGGGTTCTATAGATGAGATTGTAGATCCCTTCCTTGAACCAAATAGATATGCTTGGACTCTATATTCCATTAATAAGGTGGCTTATCTTGCATTTAGATGTCTTGCTTTTCATAGTGACATGAGGCCGACAATGATGGAAGTGGCCGAAGAGCTTGAGTACATCAGACGCCGTGCATGGGCAACTATGGAGGAAACCATATGTTTGGGTTCATCGATTGGTTCCGCAAGTTCGTCGCCTCACAATGGAAGTGAGAAGTCATTAAGTGGTCTTATGTTAAAGAAGTTAGGGCAAGAGAATTGA 840 0.4083 MNEIKLLSSVSHPNLVRLLGCCIEEGEQILVYEYMPNGTLSEHLQRERGKGLPWTIRLTIASETTNAIAYLQSSIHPPIYHRDIKSSNILLDYNYKSKVADFGLSRLGMIETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARPQSEVNLAALAVDRIRRGSIDEIVDPFLEPNRYAWTLYSINKVAYLAFRCLAFHSDMRPTMMEVAEELEYIRRRAWATMEETICLGSSIGSASSSPHNGSEKSLSGLMLKKLGQEN 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03367 279 PIRSF ILK 1 245 - -
Tsu02g03367 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Tsu02g03367 279 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 1 266 - -
Tsu02g03367 279 SMART serkin_6 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03367 279 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03367 279 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 266 IPR045274 GO:0007166
Tsu02g03367 279 Gene3D Transferase(Phosphotransferase) domain 1 36 248 - -
Tsu02g03367 279 Pfam Protein tyrosine and serine/threonine kinase 1 231 IPR001245 GO:0004672|GO:0006468
Tsu02g03367 279 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Tsu02g03367 279 SUPERFAMILY Protein kinase-like (PK-like) 1 233 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03367 Tsu-Chr2 37766276 37767115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03367 1 267 Receptor kinase-like Gene Family AT2G23450 74.157 9.22e-141 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tsu02g03367 PK_Tyr_Ser-Thr 6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03367 - - pmum:103340007 468.003