Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03337 ATGgagattatttcaattttagctTACATGTTCCTTTTTCTCTCAACTATCATCTCTTATCCATTCATAAAGAAGCACACTAAACATAAACTCACATCAAAGCCTAAGCTTCCCCCTGGTTCAATGGGTTGGCCTTATATTGGAGAAACTCTTCAACTCTACTCTCAACACCCTAACATCTTCTTTGCTTCTAAACAGAGAAgATATGGAGAAATATTTAAAACACATATACTAGGATGTCCATGTGTGATGTTAGCAAGTCCTGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTCAAGCCTACATATCCTAAAAGCAAAGAGAAACTTATTGGTTCTTCTGCATTGTTCTTTCACCAAGGACATTACCATACTCGTATTAGGAAACTCGTTCAAACCTCACTTTCTCCTGAATCAATCAAGAAATTGATCCCAGATATAGAAATCCAAGTCATTTCCTCCTTGGAATCTTGGGTTTCCTCTGGACATATCGTTAACGCTTTCCAAGAAATGAAAAAGTTCTCATTCAATATTGGCATCCTCTCTGTCTTTGGTAACTTGGAAGGCAATTATAGAGATAAGCTTAAGGAGAATTACAGCATTGTAGAGAAAGGATACAATTCTTTTCCAACTAGGATACCCGGCACTGCATACTCCAAAGCACTTTTGGCGAGGCAGAGAATTCAACAGACTATCAGTGAAATAATTTGCAAGAAAAAGGAGCAGAGATTGATTGAGAAGAATCTATTGGGCCACTTGCTAAactacaaagatgaaaaaggtgAAATGTTAAGTGATGAGGAAATAGCAGATAATGTAATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTTTTGACTTGGATTCTCAAGTATCTTCATGATGACCCGAAACTTCTTGAAGCAATAAAAATGGAGCAAATGTCAATATACGAAGCTAATGAAGGAGGGAAGATGCCATTGACTTGGAATCAAACCAGAAATATGCCTATTACACACAGGGTAATATTGGAAAGCCTAAGGATGGCAAGCATAATCTCATTTACTTTTAGGGAAGCTGTGGATGATGTAGTATACAAGGGATATTTAATACCAAAAGGTTGGAAAGTAATGCCTCTATTTAGAAACATCCACCACAATCCAGAATTCTACCCTGCTCCTCAAAGTTTTGACCCATCAAGGTTTGAGGTTTCCCCAAAGCCCAATACATTTATGCCATTTGGCAATGGAGTGCACTCTTGTCCAGGAAATGAGCTAGCCAAATTGAACATGTTGATTTTGATTCACCATCTAGTGACCAAATTTAGGTGGGAGGTAGTAGGATATAATCAAAGTGGAGTTGAATATAGCCCATTTCCTATACCAATGCATGGTCTACCAACAAGATTTTTGAGAGATCAATAA 1419 0.3679 MEIISILAYMFLFLSTIISYPFIKKHTKHKLTSKPKLPPGSMGWPYIGETLQLYSQHPNIFFASKQRRYGEIFKTHILGCPCVMLASPEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGHYHTRIRKLVQTSLSPESIKKLIPDIEIQVISSLESWVSSGHIVNAFQEMKKFSFNIGILSVFGNLEGNYRDKLKENYSIVEKGYNSFPTRIPGTAYSKALLARQRIQQTISEIICKKKEQRLIEKNLLGHLLNYKDEKGEMLSDEEIADNVIGVLFAAQDTTASVLTWILKYLHDDPKLLEAIKMEQMSIYEANEGGKMPLTWNQTRNMPITHRVILESLRMASIISFTFREAVDDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPQSFDPSRFEVSPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVGYNQSGVEYSPFPIPMHGLPTRFLRDQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03337 472 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PANTHER CYTOCHROME P450 26 8 470 - -
Tsu02g03337 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Tsu02g03337 472 Gene3D Cytochrome P450 26 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 Pfam Cytochrome P450 38 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g03337 472 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 8 470 - -
Tsu02g03337 472 SUPERFAMILY Cytochrome P450 32 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03337 Tsu-Chr2 37345999 37350509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03337 3 470 Cytochrome P450 AT3G19270 68.590 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03337 K09843 - gmx:100806350 830.476