Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03335 ATGAGTCAAGCTGAGCCGAACTCGTCTGAGCTCGACTCGATAGGAATTGGTTCAGCTCGAaacttggctcaagttagtcaCAAACTCTTTTTTCAGCTCGAGTTTGACTCGTTTAAAGTTCACCAACAGTTCAGTTTGGCTCACAATGGTGATCCCGAAGAAGATGGAAGTGATGCTCAAGGTGAACCTCATGCTAAAGAAGACCTTCATGATGTCGAAGAAGATGGAAGTGATGCACAAGGTGAAGAAGACCTTGTTGATGTCGAAGAAGATGGAAGTGATGCTGAATGTGAAGAAGGTGATGTAGAAACGGATGGAAATGATAATGGACAAGACATCGTAAATATTGATACTATTGATGACATTGTATCACTGGACCTGAAGGGCGTATGGCCTATTATGGCTAAAAATCTTGAATTTGGAAGCCTTGATATTGCAAATAGGTTTTATGAAGTCTACGCAAGAGCGAATGGATTTTCAATACGAAAAGGCAGGATCCTTCGTACCAAGGATAAAAATATTGTGCAGCGTACatttctttgccatagagaATGGTATAGGGAGGGCAGAGGACTAACTACAAAGAATCAACAGCGTGCGCCGAAACCTGAGACTCGATGTGAATGTCCAACTAAATTTCGGGTCCATATTGACATTCACTCGAATCGGTGGAGGATTACATTGTTTACAGATTATCACAACCATGATCTGCTCAGTGACGTACATTGTGGAATGCTTCCTGCCCACAGAATAGAGAAGCAACGGCATATGAGAAAGGAAGATGCACGAAATGCAATTAACTATCTTCGTGGTCTGGATTCAAATGATCCGATGATGTTTGTTCGGTACACCGCTGATTCTACGGATAGGCTTCAACACCTATTTTGGTGTGATGGTAGAAGCCATCTTGATTATCAAGTTTTTGGTGATGTTGTTGCATTTGACGCAACATATGGTAAGAACAAATACCATTGCCCTCTAGTAGTGTTTGCTGGTGTAAATAACCACAACAGTACTATTATTTTTGCTGGAGCTATTGTTTGGGACGAAAAGGAAGAAACTTATGTTTGGGTGCTTGAGCAATTCTTGGAAGCCATGTCTGGAACCCCACCCCCTTTTGTAATAACCAATGGTGATGTAGCAATGAAGAATGCAATAAAACGCGTATTCCCAAATGCTGAATAG 1185 0.4034 MSQAEPNSSELDSIGIGSARNLAQVSHKLFFQLEFDSFKVHQQFSLAHNGDPEEDGSDAQGEPHAKEDLHDVEEDGSDAQGEEDLVDVEEDGSDAECEEGDVETDGNDNGQDIVNIDTIDDIVSLDLKGVWPIMAKNLEFGSLDIANRFYEVYARANGFSIRKGRILRTKDKNIVQRTFLCHREWYREGRGLTTKNQQRAPKPETRCECPTKFRVHIDIHSNRWRITLFTDYHNHDLLSDVHCGMLPAHRIEKQRHMRKEDARNAINYLRGLDSNDPMMFVRYTADSTDRLQHLFWCDGRSHLDYQVFGDVVAFDATYGKNKYHCPLVVFAGVNNHNSTIIFAGAIVWDEKEETYVWVLEQFLEAMSGTPPPFVITNGDVAMKNAIKRVFPNAE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03335 394 MobiDBLite consensus disorder prediction 74 106 - -
Tsu02g03335 394 MobiDBLite consensus disorder prediction 47 113 - -
Tsu02g03335 394 Pfam MULE transposase domain 311 393 IPR018289 -
Tsu02g03335 394 Pfam FAR1 DNA-binding domain 148 238 IPR004330 -
Tsu02g03335 394 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 258 393 IPR031052 GO:0006355
Tsu02g03335 394 PANTHER OS02G0262500 PROTEIN 258 393 - -
Tsu02g03335 394 PANTHER OS02G0262500 PROTEIN 139 250 - -
Tsu02g03335 394 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 139 250 IPR031052 GO:0006355
Tsu02g03335 394 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03335 Tsu-Chr2 37328184 37331203 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g03335 FAR1 1.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03335 - - ccaj:109791994 276.559