Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03326 ATGAATTTCACTTGGGATGCAATGAGTGCGAAGCCACCTCTAACGAGCCAGTCTTCAATATACTCCCTCACTTTTGATGAGTTACAGAACACCGTTGGTGGAGTTGGAAAAGATTTCGGATCAATGAATATGGATGAACTGTTGAAAAACATATGGAATGTCGAAGAGACACAAACCTTGACATCTTCAGttggtggaggaggaggaggagtaGGAGTTGGAGAAGGAACTAACCCTATTGGTAATAATTTGCAAAGACAAGGCTCATTGACATTGCCGAGGACACTTAGTCAGAAAAAAGTTGATGAAGTTTGGAGGGATTTGATGAAAGATAGTGGTAATAGTGGTTCATCTATGCCTCTAAGACAACCAACATTAGGTGAAGTGACTTTGGAGGAGTTTTTGGTGAGAGCTGGTGTTGTGAAAGAAGACACGCCTAATCATGCTCAACAAATTGAAAAACCAGATAATAATAAATGGTTTAGTGATTTTTCGAGATCAAACAATAACACCAATCTACTACCCTTTCAACAACCAAATGGAAATAATGGTAATGGTGATTTGAGTGACAATAATAACTTAGTTCCTAAGCAACTTCCTCTTCCTCCTTCATCATTGAACCCGAATCAATCTCATAGGCCGCCACCACTTTTCCCGAAACCTACAAATGTAGCATTTGCTGCTCCTATTCATTTGTTAAACAATGCTCAACTTGGTAACCCTGGTAGAAGTGTAGTGCCTGGTGTTGGAATGTTTGGTTTATCTGCTGCGAATGTTGCAGCTCCTGTTGGTTCTCCAGGAAGTAAAATGTCGCCGGATGCAATTACAAAGCATAATGTAGATCCTTCTTTACCGTCACCAGTTCCTTATGGAATCAACAGAGGGAGGAAGTGTGGTGCTGTAGAAAAAGTCGTTGAAAGGAGACAAAGGAGaatgataaaaaatagagaatcaGCTGCGAGGTCACGGGCTCGCAAACAGGCCTACACTGTTGAACTAGAGGCTGAAGTTGCAAAACTTAAGGAAGTAAATGAGGAATTACAAAGAAAACAGGCAGAGTTTCTGGAAATGCAGAAAAATAAGGAGGACCTGCTAcggacaaataaaataaaattcttgaGAAGGACACTTACAGGTCCATGGTAG 1146 0.3874 MNFTWDAMSAKPPLTSQSSIYSLTFDELQNTVGGVGKDFGSMNMDELLKNIWNVEETQTLTSSVGGGGGGVGVGEGTNPIGNNLQRQGSLTLPRTLSQKKVDEVWRDLMKDSGNSGSSMPLRQPTLGEVTLEEFLVRAGVVKEDTPNHAQQIEKPDNNKWFSDFSRSNNNTNLLPFQQPNGNNGNGDLSDNNNLVPKQLPLPPSSLNPNQSHRPPPLFPKPTNVAFAAPIHLLNNAQLGNPGRSVVPGVGMFGLSAANVAAPVGSPGSKMSPDAITKHNVDPSLPSPVPYGINRGRKCGAVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEVNEELQRKQAEFLEMQKNKEDLLRTNKIKFLRRTLTGPW 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03326 381 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 310 325 IPR004827 GO:0003700|GO:0006355
Tsu02g03326 381 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 10 381 IPR043452 GO:0003700|GO:0045893
Tsu02g03326 381 Gene3D - 305 363 - -
Tsu02g03326 381 Pfam bZIP transcription factor 307 359 IPR004827 GO:0003700|GO:0006355
Tsu02g03326 381 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 305 350 IPR004827 GO:0003700|GO:0006355
Tsu02g03326 381 SUPERFAMILY Leucine zipper domain 307 356 IPR046347 GO:0003700|GO:0006355
Tsu02g03326 381 SMART brlzneu 303 367 IPR004827 GO:0003700|GO:0006355
Tsu02g03326 381 CDD bZIP_plant_BZIP46 307 361 - -
Tsu02g03326 381 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 10 381 - -
Tsu02g03326 381 MobiDBLite consensus disorder prediction 151 200 - -
Tsu02g03326 381 MobiDBLite consensus disorder prediction 145 220 - -
Tsu02g03326 381 Coils Coil 326 367 - -
Tsu02g03326 381 MobiDBLite consensus disorder prediction 201 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03326 Tsu-Chr2 37243155 37246676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03326 13 381 bZIP Transcription Factor Family AT4G34000 46.453 6.06e-93 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g03326 bZIP_1 1.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03326 K14432 - gmx:100776600 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03326 02 37243155 37246676 Tsu02g03326 02 37243155 37246676 ECH