Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03319 ATGTTCCTCTTAAGATTTCCCTCTTTGTTGGGATTGTTACATTTTCTTGGAATGCATTTACCTCTTCTAATGGCTGATTGCCCTTTAGATTTTGCTGCTTCAAACTTTACACTGGCATCCACTTTATGCAATGACCAAGGTGAGCGGGGAAAATGTTGCCGCTACATTAATGCTAATATTGCAATTTCTGTTGCTCGTTTTGCTAATGCAACAAGCGACCTAGGGGTCCCTCTAAATACCTCTGATATCTGCCTTCAAACCATATCTCAGACCTTGCAACTTTATGGAGTTCCACCACTTGCAGCAGTTTTCTGTGGATTCGGGACAAAAATTCGTGTTAATTATGAATGCAAAGGTCGGACTAGTGTCATGCAAATGCTGCAATCTCCCAGATTTGTGGAGGTCGTACAAAATTGCAAAGTGCCACTTGGAAAGGAAAGTAAATGTAAGAAGTGCTTAAACGCCAGCATTGGTTATCTGCATCGTTTAGGAATTGATGATAATATTACATTGAGTACATGCCGTGATGCCAGTTTTGTTGCGCTAGCAAGCCAAGTTGATAAGATGTATACCACTGATATTGCAAGTTGTTTCTTTGGCGTTCAAGGACTTCTCGGCCCTATTGTTTCAGAATCATCCCCACCAGTACCTGCTCCTGAGGCTTCTCCAAGTCCGCTGGTTGCTGCTGATAGCCCAAGTCAACTATTGTTAGGTCTACCTTCTAAGGGAAAACACCATTCATATCACTTGACATTAGTTCCATGTATTGCTATGGCAGTTACAGCTGTTGCTTTTGTGATGTTCATAGTTTTGATAGTTCTTATTcggaaaaaaagaagagagcTAGATGAGCCCGATAATGTTGCTAAACCCCATTCGAAAACCTTACCACCTATGCCAACATGGAAATTTCAGGAAGGCTCTTCATCTATGTTTCGAAAGTTCAATTTCAAAGAGATAAAGAAGGCAACAGAGGGTTTTAGCACCGTCATTGGCCAAGGAGGCTTTGGAACAGTATATAAAGCTCATTTTAGTGATGGCCAAGTTGCAGCGGTAAAGCGGATGGACAGAATCTCAGAACAGGGAGAGGATGACTTCTGCCGAGAAATTGAGCTTCTTGCTCGACTGCACCATCGGCATCTTGTTGCGTTAAGAGGCTTTTGTATCAATAAACAAGAAAGGTTTCTGTTGTACGAGTACATGGGAAATGGAAGCTTAAAAGATCATCTTCATTCCCCTGGTAAAACACCATTAAGTTGGCGAACTAGAATCCAAATTGTTATTGATGTGGCCAATGCCCTGGAATACCTTCATTTCTATTGTGATCCTCCTCTATGTCACAGAGATATCAAGGCTAGCAACACTTTACTGGACGAGAACTTTGTTGCTAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAGATGGTTCGATATGCTTTGAACCTGTAAATACCGAAATCTGGGGAACTCCAgGTTATATGGATCCAGAATATGTTGTTACTCAAGAGCTCACCGAGAAAAGCGATATATACAGTTTTGGGGTGTTACTACTGGAAATTGTGACAGGAAGAAGAGCTATTCAAGATCATAAGAATTTGGTAGAATGGGCCAAACCATACATGGAATCAGAAACTAGATTATTAGAGCTAGTAGATCCTAATGTGAGAGAGTCCTTTGACTTGGATCAGCTTCAAACAGTAATCTCTATAGTAGGATGGTGCACACAGAGAGAAGGAAGGGCAAGGCCTTCAATAAAACAAGTACTTAGGCTTCTGTATGAGACATCAGAACCAATGCATAATGAGTTTCTACAAGCTGTTGAAGATGAGGAGAATCAGGGAAATGAGCAGAGAGGCAGAAGAAGCAAAGGGAAAATGTTCAGAAATGAAGGAAATTTTCACAGTGGGGATGGAAGATATCTTGCTTCGTCTTCGAGTACGTCTCGGTCATATTGTAGTAGAAGCTTTTTACTAGAAAATGGGTCGCCGCAGTCATCACCAAATATATTTTCAGGCTGA 2022 0.408 MFLLRFPSLLGLLHFLGMHLPLLMADCPLDFAASNFTLASTLCNDQGERGKCCRYINANIAISVARFANATSDLGVPLNTSDICLQTISQTLQLYGVPPLAAVFCGFGTKIRVNYECKGRTSVMQMLQSPRFVEVVQNCKVPLGKESKCKKCLNASIGYLHRLGIDDNITLSTCRDASFVALASQVDKMYTTDIASCFFGVQGLLGPIVSESSPPVPAPEASPSPLVAADSPSQLLLGLPSKGKHHSYHLTLVPCIAMAVTAVAFVMFIVLIVLIRKKRRELDEPDNVAKPHSKTLPPMPTWKFQEGSSSMFRKFNFKEIKKATEGFSTVIGQGGFGTVYKAHFSDGQVAAVKRMDRISEQGEDDFCREIELLARLHHRHLVALRGFCINKQERFLLYEYMGNGSLKDHLHSPGKTPLSWRTRIQIVIDVANALEYLHFYCDPPLCHRDIKASNTLLDENFVAKIADFGLAQASKDGSICFEPVNTEIWGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDHKNLVEWAKPYMESETRLLELVDPNVRESFDLDQLQTVISIVGWCTQREGRARPSIKQVLRLLYETSEPMHNEFLQAVEDEENQGNEQRGRRSKGKMFRNEGNFHSGDGRYLASSSSTSRSYCSRSFLLENGSPQSSPNIFSG 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03319 673 Pfam SPARK 25 163 IPR043891 -
Tsu02g03319 673 Gene3D Phosphorylase Kinase; domain 1 299 400 - -
Tsu02g03319 673 PANTHER OS01G0750732 PROTEIN 9 672 - -
Tsu02g03319 673 MobiDBLite consensus disorder prediction 606 647 - -
Tsu02g03319 673 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Tsu02g03319 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Tsu02g03319 673 Gene3D Transferase(Phosphotransferase) domain 1 401 620 - -
Tsu02g03319 673 SMART serkin_6 325 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03319 673 SUPERFAMILY Protein kinase-like (PK-like) 305 596 IPR011009 -
Tsu02g03319 673 CDD STKc_IRAK 331 593 - -
Tsu02g03319 673 PANTHER BNAC06G02630D PROTEIN 9 672 - -
Tsu02g03319 673 Pfam Protein kinase domain 329 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03319 673 ProSiteProfiles Protein kinase domain profile. 325 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03319 673 MobiDBLite consensus disorder prediction 606 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03319 Tsu-Chr2 37168534 37174166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03319 19 672 Receptor kinase-like Gene Family AT3G19300 59.878 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Tsu02g03319 Pkinase 6.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03319 - - ahf:112715638 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03319 02 37168534 37174166 Tsu02g03319 02 37168534 37174166 ECH