Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03312 atgaGGCAGCAAGCAAATGAAACTGGAGAAGCTGCTGCAATACCAATTACTGTAAGGCAGCTGGAAGCTATTGTTACAAGTACCGAGTATGAGGGACATAAAGGGTGTATAGCAATTGGGCGCTTGGAAGCTGGAGTTTTAGAAAAAGGGATGGAGGTCAAGGTATGCACTTCAGAAGATTCATGTAGATATGCAAGAGTTAGCGAGCTTTATGCATATGAAAAATTCTTTAGGGTCCCTGCAGAAAGGATTCGGGAGACAATTGCGGATAAAGTGACTGGGAAGGCACTGTCTTCCATCAAAGTGGAAGAACCAACAGTGAAAATGGCTTTCTCCGTAAACACTTCACCTTTTGTCGGTCGTGAGGGAAAGTATGTTACCAGTAGGAATTTAAGGGACAGGCTTTATCGTCAACTTGAGCGAAATCTGGCTATGAAGGTTGAAGATGGTGAAACAGCCGATACATTAATTGTCAGTGGGTGCGAAACTCTGCATATCACCATACTCATTGAAAATATGACATTAATGAAGAATGGATTTAAGACCAAACCTGCTTTTGTTATGATGGTTTGA 573 0.4171 MRQQANETGEAAAIPITVRQLEAIVTSTEYEGHKGCIAIGRLEAGVLEKGMEVKVCTSEDSCRYARVSELYAYEKFFRVPAERIRETIADKVTGKALSSIKVEEPTVKMAFSVNTSPFVGREGKYVTSRNLRDRLYRQLERNLAMKVEDGETADTLIVSGCETLHITILIENMTLMKNGFKTKPAFVMMV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03312 190 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 21 174 - -
Tsu02g03312 190 SUPERFAMILY EF-G C-terminal domain-like 103 179 IPR035647 -
Tsu02g03312 190 Gene3D Translation factors 17 103 - -
Tsu02g03312 190 PANTHER BNAC09G43450D PROTEIN 21 174 - -
Tsu02g03312 190 SUPERFAMILY Translation proteins 21 84 IPR009000 -
Tsu02g03312 190 Gene3D Elongation Factor G (Translational Gtpase), domain 3 104 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03312 Tsu-Chr2 37066474 37069847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03312 1 29 Core DNA Replication Machinery Family AT2G07690 72.414 4.99e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03312 K06207 - gmx:100785222 239.58