Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03306 atggagaaatTGGAGCAAGTTCAATGTTTTGGCCGCAAGAAGAACGCGGTTGCCGTCACATACTGCAAGCGTGGCCGTGGATTGATCAAGATCAACGGTGTTCCCATCGAGTTGATTGAACCAGAGATCCTCCGTTTCAAAGCCTTGGAACCAATCCTCTTGTTGGGAAAAAGCCGTTTTGCCGGCGTCGACATGCGCACCCGTGTCACAGGCGGTGGTAAAGTTTCTCAGATTTACGCGATCAGACAGAGTTTAACTAAGGCTCTGGTTGCTTTTTACCAGAAGTTCGTTGATGAACAGAGTAAGAAGGAGATTAAGGATATTCTTGTTCGTTACGATCGTACTTTGCTTGTTGCTGATCCTAGGCGTTGTGAGCCAAAGAAGTTTGGTGGTCGTGGTGCTCGTGCTAGGTTCCAAAAATCTTACCGTTGA 432 0.4653 MEKLEQVQCFGRKKNAVAVTYCKRGRGLIKINGVPIELIEPEILRFKALEPILLLGKSRFAGVDMRTRVTGGGKVSQIYAIRQSLTKALVAFYQKFVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03306 143 Gene3D - 1 143 IPR014721 -
Tsu02g03306 143 Pfam Ribosomal protein S9/S16 11 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Tsu02g03306 143 PANTHER - 3 143 - -
Tsu02g03306 143 SUPERFAMILY Ribosomal protein S5 domain 2-like 6 143 IPR020568 -
Tsu02g03306 143 PANTHER RIBOSOMAL PROTEIN S9 3 143 IPR000754 GO:0003735|GO:0005840|GO:0006412
Tsu02g03306 143 ProSitePatterns Ribosomal protein S9 signature. 71 89 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03306 Tsu-Chr2 37004165 37004691 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03306 5 143 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 83.453 2.93e-85 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03306 K02960 - gmx:100779794 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03306 02 37004165 37004691 Tsu02g03306 02 37004165 37004691 ECH