Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03282 atgtggtcagaagctatgaAAAATGCATGGGGAGAAGCTCATGATCAACTAGCCAATGCCATCAAAGCTGAAATGAAAGAAGCTCATGATCAGCACGCCAATGCCAATTTGATAAACCAAAGATTAGCTATAGTTTTCCCTATCATTCAAGCCTTTAAAAACACAATAACCTCTGACCCTTTAGGAATAACCTCAACATGGGATGGTCCGGATATATGCAACTACACCGGCTTCTACTGCGATAACCCACCGGATAATCTCACGGCCATCACTGTCGCATCCATAGATTTCAACGGCTTTCAACTCTCCGCTCCATCTCTCGATGATTTCATCGATCAACTCCCGGACATGGCTGTTTTCCATGCTAACTCCAACAATTTCAAAGGCACCATTTCGCCAAAAATTGCATCACTCAAATATTTATACGAACTTGATCTTAGTAACAATCTTCTCTCCGGAACATTTCCcacttcaattttaaatatgcCGACACTTTCATTCTTAGACATTCGGTACAATCTCTTCACTGGAACAGTTCCTCAACAAATTTTCACACAAACATATTTGGATGTAATTTTCCTCAACAATAACAACTTCCTTCAAACACTTCCAAACAATTTAGGCCAAACAACAGCTTCTTACATTACTTTCGCTAACAATAAATTCACCGGTCCAATCCCACCTAGTATAGGAAAAGCGTCGTCCACACTAGTCGAAGTTTTATTATTAAACAACCAATTGACCGGTTGTCTTCCTTACGAAATAGGCTTCCTTAATAACCTCGAACTTTTTGATGCCGGTGGTAACTTTTTAACAGGTCCAATACCATTATCATTTGGATGTTTGAAGAAAGTTGAGCAGTTAAACTTGGCTAGGAACATGTTGTACGGTCAGGTTCCGGAAGTGGTTTGCGCATTGGGGAATTTAGCGAATTTATCGTtatcttataattattttaatagagTTGGACCCTTGTGCAAGAAACTTATAAGAAGTGGTGTGCTTCATGTGAGCAAGAATTGTATTTTTGATCTTCCGGATCAGAGATCGATGCAGGAGTGTGTGAAGTTTTTTGCATCTCCGAGAACTTGTCCGCATTCTGGATCGTTTAATGTTACGCCTTGTCAAGTTGCTACACGGGGGAAACCTGGAAATAAGAGGAATTTGTTGTCTTATTCGGCTCTTGAGAGAAACAGAGTTGTTCTGTAA 1209 0.3854 MWSEAMKNAWGEAHDQLANAIKAEMKEAHDQHANANLINQRLAIVFPIIQAFKNTITSDPLGITSTWDGPDICNYTGFYCDNPPDNLTAITVASIDFNGFQLSAPSLDDFIDQLPDMAVFHANSNNFKGTISPKIASLKYLYELDLSNNLLSGTFPTSILNMPTLSFLDIRYNLFTGTVPQQIFTQTYLDVIFLNNNNFLQTLPNNLGQTTASYITFANNKFTGPIPPSIGKASSTLVEVLLLNNQLTGCLPYEIGFLNNLELFDAGGNFLTGPIPLSFGCLKKVEQLNLARNMLYGQVPEVVCALGNLANLSLSYNYFNRVGPLCKKLIRSGVLHVSKNCIFDLPDQRSMQECVKFFASPRTCPHSGSFNVTPCQVATRGKPGNKRNLLSYSALERNRVVL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03282 402 SUPERFAMILY L domain-like 52 343 - -
Tsu02g03282 402 Gene3D Ribonuclease Inhibitor 48 212 IPR032675 -
Tsu02g03282 402 Gene3D Ribonuclease Inhibitor 213 357 IPR032675 -
Tsu02g03282 402 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 29 398 - -
Tsu02g03282 402 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 29 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03282 Tsu-Chr2 36747825 36753040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03282 39 370 Leucine-rich Repeat extension Gene Families AT3G24480 43.373 4.66e-85 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03282 - - gmx:100813314 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03282 02 36747825 36753040 Tsu02g03282 02 36747825 36753040 ECH