Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03281 atgagaaaaacaaagtCCTTTTCCTTTCAATTCTTATCAATAACATGTGTTTTCTTGCTTCACTTTCAATCTATAATTCATGCACAAGACCATATAGCAACTTCAGAATATGAAGCACTAGGCCTAACAAAAGAACCAAAAAGAGAAACACTAGAAATCATCATCGGGGGAGGAGGCGGTTATTCCCCCGCTCCTTCCCCTGAACCTAACTGTCCTCCTCCTCAACCTCCCGCACCTAAGCCCATTTCCCCCCGACTAGCAAGGGCCCGCAAAGTACTTATCCAATTCGCTAAAACGGTCAAGCCAAATAAGATCACTAATACCTGGAACGATAAAACTAGAAGTCCATGTGATTTTCTCGGAATCCTTTGCGGTACATACCCAGACGATAACCAACGAGCAGTTGCTGGATTAGACTTAAACCAACAAAGACTCTCAGGTAAAACCTGTGAGAATATACCATTAACCGGTCTCTTAGACCAATTAGAAGAGTTAACATTTTTCCATGTAAACTCAAACAATTTCTCAGATAACATCCCAACACAAAtcactaaattcaaatatttctaCGAACTTGACCTTAGTAACAACAAATTTGTTGGCAAGTTTCCGACCGATGTTATTTTTCAAGCTACACAACTAGTTTTTCTAGACCTCAGGTTCAACGGTTTAACCGGTTCTATTCCAGCAAATCTTTTTCAAAAGGATCTTGACGTaattttcatcaacaacaaccaatTCAGCGGAAGTTTACCTGCGAATTTCGGGTCTACCCCTGCAAGGTACTTAACATTTGCACGCAATCAATTCACAGGTGAAATTCCTAAAAGTATCGGTGATGCTTCGAAAACTTTAACTGAAGTACTTTTTTTGggaaataaatttgaagggtGTTTACCATTTGAAATTGGGTATCTGAAAAAAGCAACAGTTTTTGATGTTAGTATAAATTCATTAACTGGGCCTATTCCAGCTTCATTTGGTTGTTTGGAAAAGATTCAGTTTTTGAATTTAGCAAGTAACAAATTCTATGGTACTGTTCCTGAAAGTGTTTGTGTTCTACCTGGGATTAAAAACAATGGAAATTTGTCTTTGTCAAATAATTATTTCACTGCAATTGATCCATCATGTTGGAGTTTGTTGAAATCTAAGATATTGGATGTTAGTAACAATTGTATTCCTGGTCTTCCTAATCAAAGATCAAAGAAAGAATGTTATGATTTCCAATGTAAGATTAAGCCATGTTCTAATCATCAGAGTCTGAGTTATGTTCCTTGTAAGACACGTTGGGGTGCTAAACAAGACACTGCTCCTGTTTCTCAAGAAATGGCTAAAGAGCCTGTTACTTACAAGTCTCTCAAACCTCATCATCGGTTGAGAATGTGA 1386 0.3608 MRKTKSFSFQFLSITCVFLLHFQSIIHAQDHIATSEYEALGLTKEPKRETLEIIIGGGGGYSPAPSPEPNCPPPQPPAPKPISPRLARARKVLIQFAKTVKPNKITNTWNDKTRSPCDFLGILCGTYPDDNQRAVAGLDLNQQRLSGKTCENIPLTGLLDQLEELTFFHVNSNNFSDNIPTQITKFKYFYELDLSNNKFVGKFPTDVIFQATQLVFLDLRFNGLTGSIPANLFQKDLDVIFINNNQFSGSLPANFGSTPARYLTFARNQFTGEIPKSIGDASKTLTEVLFLGNKFEGCLPFEIGYLKKATVFDVSINSLTGPIPASFGCLEKIQFLNLASNKFYGTVPESVCVLPGIKNNGNLSLSNNYFTAIDPSCWSLLKSKILDVSNNCIPGLPNQRSKKECYDFQCKIKPCSNHQSLSYVPCKTRWGAKQDTAPVSQEMAKEPVTYKSLKPHHRLRM 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03281 461 Gene3D Ribonuclease Inhibitor 88 259 IPR032675 -
Tsu02g03281 461 MobiDBLite consensus disorder prediction 65 83 - -
Tsu02g03281 461 Gene3D Ribonuclease Inhibitor 260 425 IPR032675 -
Tsu02g03281 461 MobiDBLite consensus disorder prediction 54 83 - -
Tsu02g03281 461 SUPERFAMILY L domain-like 100 394 - -
Tsu02g03281 461 Pfam Leucine rich repeat N-terminal domain 89 124 IPR013210 -
Tsu02g03281 461 PANTHER BNAC05G26270D PROTEIN 31 454 - -
Tsu02g03281 461 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 31 454 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03281 83 408 Leucine-rich Repeat extension Gene Families AT3G24480 41.641 1.60e-76 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03281 - - cam:101512430 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03281 02 36734067 36735935 Tsu02g03281 02 36734067 36735935 ECH