Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03270 ATGGATGATTACTACAATATTCTTGGTGTTAGTTCAGATTCTTCCATTGATGAAATAAGGCGTGCCTATAGAAAGCTTGCTATGCAATGGCATCCAGATAGATGGACAAGAACACCTTCTTTATTAAGTGAAGCCAAATGTAAATTTCAGAAAATTCAAGAAGCTTATTCAGCAGTGTTATCTGATCCCAAGAAAAGAACTATGTATGATGCTGGTTTGTATGATCcacaagaggaagaagatgagGAATTTTCTGATTTTGTGGATGAAATGGTATCCCTTATGGCTGAAGTTAGGCGAGAGGAGAAGGTTTATGGTTTGGAGGAGTTGCAGGCCATGTTCATGGAAATGGCAGAAGGATTTGAGTATCCTTCAATGTATTATGGGACAACATCGATAATTGATGAATCCTCCTGTGCTAACAGAGGAAGTGTTTTGACACAATAG 447 0.3624 MDDYYNILGVSSDSSIDEIRRAYRKLAMQWHPDRWTRTPSLLSEAKCKFQKIQEAYSAVLSDPKKRTMYDAGLYDPQEEEDEEFSDFVDEMVSLMAEVRREEKVYGLEELQAMFMEMAEGFEYPSMYYGTTSIIDESSCANRGSVLTQ 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03270 148 Pfam DnaJ domain 3 70 IPR001623 -
Tsu02g03270 148 ProSiteProfiles dnaJ domain profile. 3 73 IPR001623 -
Tsu02g03270 148 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 140 - -
Tsu02g03270 148 SMART dnaj_3 2 65 IPR001623 -
Tsu02g03270 148 CDD DnaJ 3 62 IPR001623 -
Tsu02g03270 148 Gene3D DnaJ domain 1 121 IPR036869 -
Tsu02g03270 148 PANTHER PUTATIVE, EXPRESSED-RELATED 4 140 - -
Tsu02g03270 148 SUPERFAMILY Chaperone J-domain 2 76 IPR036869 -
Tsu02g03270 148 PRINTS DnaJ domain signature 5 23 IPR001623 -
Tsu02g03270 148 PRINTS DnaJ domain signature 44 64 IPR001623 -
Tsu02g03270 148 PRINTS DnaJ domain signature 23 38 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03270 Tsu-Chr2 36595023 36596449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03270 4 71 C2H2 Transcription Factor Family AT1G74250 49.275 6.93e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03270 - - gmx:100306079 213.386