Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03262 ATGTCTTCAAATGATATCACAAAAATGGAAGAAGGTGATCTTAAGGCACAAGTAGAATGCGATTCTAGTTTTTGTGGTTCTCCTGAAGTAGTTCAAATCATACAAAAGGTAATAGCAGAGGTGATAGGAACATACTTCTTAATATTTTCAGGTTGTTGTGTAGTAGTTCTTAATAAAGCAGAAGAGACTAAAGGGATAATAACATTTCCTGGAATTTGTGTAACATGGGGTCTAACAGTTATGATCTTGGTTTATTCTCTCGGTCACATTTCTGGTGCTCATTTCAATCCTGCAGTTACAGTTAGCTTCGCCATCTATCGACATTTCCCACTCAAACAGGTGCCATTGTATCTTGCTGCACAAGTGGTAGGATCTGTCCTTGCTAGTGGAACATTGTACCTTCTGTTTGATGTAGATGAAGATTCTTTTTTCGGAACAACACCAGCAGGATCTAATATGCAATCTCTTGTGTTTGAGATTCTCACATCATTTCTCTTAATGTTTGTTGTATCTGCAGTTGCCACAGACAACAGAGCTATTGGAGAATTGGCTGGGATTGCTGTTGGTATGACAGTTATGGTAGATGTCTTCATTGCAGGGCCTGTGTCAGGTGCATCTATGAACCCAGCTAGAACTTTTGGGCCTGCTTTGGTGATGCATATTTACAAAGGATTTTGGGTTTATGTTGTTGGACCTTTTCTTGGTGCCATATTAGGTGCCTCAGCCTATAACTTGATTAGATTCACAGACAAACCACTTAGGGAATTAAGCCAAAGCTCAAGTTTTCTTAGAAGAGCAAGCTTTCGATAG 810 0.3938 MSSNDITKMEEGDLKAQVECDSSFCGSPEVVQIIQKVIAEVIGTYFLIFSGCCVVVLNKAEETKGIITFPGICVTWGLTVMILVYSLGHISGAHFNPAVTVSFAIYRHFPLKQVPLYLAAQVVGSVLASGTLYLLFDVDEDSFFGTTPAGSNMQSLVFEILTSFLLMFVVSAVATDNRAIGELAGIAVGMTVMVDVFIAGPVSGASMNPARTFGPALVMHIYKGFWVYVVGPFLGAILGASAYNLIRFTDKPLRELSQSSSFLRRASFR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03262 269 PANTHER AQUAPORIN NIP4-1 9 266 - -
Tsu02g03262 269 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g03262 269 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g03262 269 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g03262 269 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g03262 269 PRINTS Major intrinsic protein family signature 35 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g03262 269 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g03262 269 CDD MIP 35 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g03262 269 SUPERFAMILY Aquaporin-like 32 256 IPR023271 -
Tsu02g03262 269 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Tsu02g03262 269 Gene3D Glycerol uptake facilitator protein. 3 260 IPR023271 -
Tsu02g03262 269 PANTHER AQUAPORIN NIP2-1 9 266 IPR034294 -
Tsu02g03262 269 TIGRFAM MIP: MIP family channel proteins 39 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g03262 269 Pfam Major intrinsic protein 31 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03262 Tsu-Chr2 36512789 36514398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03262 1 267 Major Intrinsic Protein MIP AT5G37810 64.552 3.47e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03262 K09874 - gmx:100819179 390.578