Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03250 ATGGATCCTAATTCTTGCAACATGCACTCACATTGTGTACACATGGAAATTCATCAAGTTGTTCCACCACCACACAAAAGCACTTTACATAAACTCAATGTTAGGCTTAAGGAAACTTTTTTCCCTGATGATCCTTTGCGCCAATTCAAAGGAAAATcacttaaaacaaaaattatctTAGGAGCTAAATATTTTTTCCCTATTCTTCAATGGGGTTCTAATTATAGCTTCAAACTCTTTAAATCTGACCTTGTTTCTGGTCTCACTATTGCTAGCTTAGCCATCCCACAgggAATTAGTTATGCTAAGCTTGCAAATCTTCCTCCAATTGTAGGACTATaTTCTAGTTTTGTTCCTCCACTTATTTATGCTGTTCTTGGAAGTTCAAGGGATCTAGCAGTAGGACCTGTTTCAATTGCATCTCTTGTTTTAGGATCCATGCTTAGACAAGAAGTATCTCCTTCACAAGAACCTGTTCTGTTTCTACAACTTGCTCTTACTTCAACTTTTTTTGCTGGTTTATTTCAAGCTTCACTAGGAATTCTAAGATTAGGATTTATCATTGATTTTTTATCAAAGGCAATCTTAATTGGATTCATGGCTGGTGCTGCTATAATTGTGTCTTTGCAACAACTTAAGAGCTTACTTGGAATCACACATTTTACTAAAGAAATGGGTCTTGTTCCTGTTATGAGTTCTGTTTTTCACAATATACATGAGTGGTCATGGCAAACAATAGTGATGGGAATTTGCTTCTTGGTGCTACTATTAATAGCAAGACACGTTAGTATAAGGAAACCAAAGCTATTCTGGGTCTCTGCTGGAGCTCCTCTTATGTGTGTCATCATCTCTACTCTTCTGTGTTTTGCAATCAAGGCTCAAAATCATGGCATCAGTTTAATTGGAAAATTACATCAAGGAATAAATCCTTCTTCATGGAATATGTTGAAATTTCATGGAAGTCACCTTGGTCTAGTCATGAAAACTGGCCTTATCACTGGCATTTTGTCCCTCACTgaAGGTATTGCAGTAGGAAGGACATTTGCAGCTCTTGGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGGTTTATGAATGTGGTTGGCTCCTCCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGTTCAGCTGTTAATAATAACGCAGGAGCGAAAACAGCAGCTTCAAATATAGTAATGTCTGTGACAGTGATGGTGACACTTCTTTTTCTTATGCCATTGTTCCAATACACACCTAATGTTGTATTGGGTGCAATCATAGTCACAGCAGTGATTGGCCTCATCGATATCCCTGCTGCTTGCCACATTTGGAAGATAGACAAATTCGACTTCCTTGTGATGTTAACTGCTTTCTTGGGTGTTATTTTTATCTCTGTCCAGGAAGGTCTTGCTATTGCAGTTGGATTATCAACTTTTAGGATACTCCTGCAAATTACAAGGCCGAAAACAGTAATGATGGGGAATATACCAGGGACAGATATATACAGAAATCTTCATCAATACAAGGACGCAACAAGAATACCAGGCTTTCTTATTTTAAGCATCGAGGCTCCAATCAATTTTGCAAACATCACATATCTTAATGACAGAACATTACGAtggattgaagaggaagaagaagataacaTAAAGGAACACTCAAGTCTTCGATTTTTAATCCTAGATATGTCAGGTAATGTCAGTTTTTTTATACATCTAATGTGGAATTCCGTAGTGTCAACAGCACTGCATTTGCTTCAAAATTGCTGA 1782 0.3653 MDPNSCNMHSHCVHMEIHQVVPPPHKSTLHKLNVRLKETFFPDDPLRQFKGKSLKTKIILGAKYFFPILQWGSNYSFKLFKSDLVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPSQEPVLFLQLALTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKEMGLVPVMSSVFHNIHEWSWQTIVMGICFLVLLLIARHVSIRKPKLFWVSAGAPLMCVIISTLLCFAIKAQNHGISLIGKLHQGINPSSWNMLKFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALGNYKVDGNKEMMAIGFMNVVGSSTSCYVTTGAFSRSAVNNNAGAKTAASNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACHIWKIDKFDFLVMLTAFLGVIFISVQEGLAIAVGLSTFRILLQITRPKTVMMGNIPGTDIYRNLHQYKDATRIPGFLILSIEAPINFANITYLNDRTLRWIEEEEEDNIKEHSSLRFLILDMSGNVSFFIHLMWNSVVSTALHLLQNC 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03250 593 PANTHER BNAA09G30120D PROTEIN 16 569 IPR030313 -
Tsu02g03250 593 TIGRFAM sulP: sulfate permease 67 568 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu02g03250 593 PANTHER SULFATE TRANSPORTER 16 569 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu02g03250 593 Pfam STAS domain 512 569 IPR002645 -
Tsu02g03250 593 Pfam Sulfate permease family 80 460 IPR011547 GO:0016021
Tsu02g03250 593 Gene3D STAS domain 491 574 IPR036513 -
Tsu02g03250 593 ProSiteProfiles STAS domain profile. 511 569 IPR002645 -
Tsu02g03250 593 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03250 Tsu-Chr2 36324473 36331751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03250 15 569 Inorganic Solute Cotransporters AT3G15990 68.402 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03250 K17471 - gmx:100787284 993.03