Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03240 ATGTCTGATTCATTCTGTAGCTTTCTCTCTGTTACCCCAAATTCCAACCTTAATTCCCATGCACCTCCAAAACTCCCTACTATCTCCTCAATTCTTCAACCTTATTGTATTTGCACCCATTGCAACCATCTTCTCCACTTCAATCACCATCTTGCTCATGTAGCAGAGCAAGGTAGAAGCAATAATATGCAGCCACAGCAAAGCTCAAGATGGAGTCCAACACCAGTTCAATTACTAGTCCTTGAAGAATTGTATAGGCAAGGCATGAAAACACCATCAGCCGAACAAATCCAACAAATAGCTTCACAGCTTCGACAATTCGGGAAGATTGAAGGGAAAAATGTGTTCTATTGGTTCCAAAATCATAAGGCGAGAGAGCGACAGAAGCGTCGTCGCCGGGAAATGGAGGAAAAAACTAGTccttcaaatgaaaataaaaaagagaaagagaaTACAGGATTGAAAGAGACAGGTAGTGGAGTTAAAGAGACAAAGAAGTGGGCAACCACTTCAAACTGCAGTGAACAAGCAGAGGATATAGCAGAAAAGGGATCAATACAAGTTTTGAGGAAAAACATAGCTGCAGAAAGGCAAGGAAAGTGCCAAAATATTGAAATTCCTTATTACTTCACACCTTTTACTAAAACTACTTCAGTAGCAGAAGCATACAGAACATGTTGTAATATTAACACACCTCATCAAAATTATGAAGAACAAAATGCAGATTATCCTAGGACACTGGATCTTTTTCCAATTAAGGAGGATGAACAACATGGAATTTGTTTCTCTGAGAGAAAATCTATGTTCTGTGTTAATGCTTCTTCAATGAACACTCATGAAATCACATCTCCCAACCAGTTTTTTGAGTTTCTTCCTTTAAGAAATTGA 888 0.3761 MSDSFCSFLSVTPNSNLNSHAPPKLPTISSILQPYCICTHCNHLLHFNHHLAHVAEQGRSNNMQPQQSSRWSPTPVQLLVLEELYRQGMKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRREMEEKTSPSNENKKEKENTGLKETGSGVKETKKWATTSNCSEQAEDIAEKGSIQVLRKNIAAERQGKCQNIEIPYYFTPFTKTTSVAEAYRTCCNINTPHQNYEEQNADYPRTLDLFPIKEDEQHGICFSERKSMFCVNASSMNTHEITSPNQFFEFLPLRN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03240 295 SMART HOX_1 66 133 IPR001356 GO:0003677
Tsu02g03240 295 MobiDBLite consensus disorder prediction 126 168 - -
Tsu02g03240 295 MobiDBLite consensus disorder prediction 130 162 - -
Tsu02g03240 295 Gene3D - 60 129 - -
Tsu02g03240 295 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 30 295 IPR044555 GO:0003700|GO:0099402
Tsu02g03240 295 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 30 295 - -
Tsu02g03240 295 SUPERFAMILY Homeodomain-like 62 131 IPR009057 -
Tsu02g03240 295 CDD homeodomain 70 124 IPR001356 GO:0003677
Tsu02g03240 295 Pfam Homeodomain 68 128 IPR001356 GO:0003677
Tsu02g03240 295 ProSiteProfiles 'Homeobox' domain profile. 64 129 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03240 Tsu-Chr2 36219470 36221669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03240 62 295 Wox Gene Family AT3G18010 33.117 1.73e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tsu02g03240 Homeodomain 4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03240 - - cam:101505693 375.941