Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03237 ATGGAGAACATTTTAGGTCTTATCAGACTTCGTATAAAAAAAGGCACTAATCTCATACCTCGCGATTCTCGTACCAGTGACCCTTATGTTGTTGTAACCATGGCGGAACAGACACTGAAAACTGGTGTTGTGAAAGATAACTTACATCCTGAATGGAATGAAGAATTAACACTTTATATTCAAGATAAAAATGTTCACACACCAATACTACTGaaagTTTGTGACAAAGACACTTTCACTGTGGATGACAAAATGGGTGAAGCAGAAATAGACATAAAACCATATCTTCAATGTGTGAAGATGGGATTGAACGATCTCCCAGATGGACATGTAGTTAAAATGATTCAACCAGATAGGACGAATTGTCTTACCGAAGAAAGTAGCTGCGTATGGAGAAATGGTAAAGTTGTCCAAGAAATGAGTTTAAGATTGAGAAACGTCAAGTCTGGTGAAGTACTCATCGAAATTGAGTGGATGGATGTTACAGATTCCAAAGGCTTATCAGAGGTTGAGATTTAG 519 0.3738 MENILGLIRLRIKKGTNLIPRDSRTSDPYVVVTMAEQTLKTGVVKDNLHPEWNEELTLYIQDKNVHTPILLKVCDKDTFTVDDKMGEAEIDIKPYLQCVKMGLNDLPDGHVVKMIQPDRTNCLTEESSCVWRNGKVVQEMSLRLRNVKSGEVLIEIEWMDVTDSKGLSEVEI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03237 172 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Tsu02g03237 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 169 IPR044562 -
Tsu02g03237 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 160 IPR035892 -
Tsu02g03237 172 Gene3D C2 domain 4 170 IPR035892 -
Tsu02g03237 172 Pfam C2 domain 7 94 IPR000008 -
Tsu02g03237 172 SMART C2_3c 7 104 IPR000008 -
Tsu02g03237 172 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03237 Tsu-Chr2 36182273 36183706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03237 39 168 C2H2 Transcription Factor Family AT1G70790 54.545 2.87e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03237 - - gmx:100781585 276.944