Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03180 ATGGGTTTTCGTCTACCTAGTATCATCAAAAGGGAATCATCTTCAAAAGGTGTGGATGTGCCAAAAGGATATCAAGCAGTATacgtaggagagaaaatgaagcGTTTTGTGATCCCTATATCATACTTGAGCCAAACCTCATTTCAAGAGTTGTTGAGCCAAGCTGAGGAACAATTTGGATATGACCATCCCATGGGTTGTATCACGATTCCTTGCAGAGAAGTCATTTCTTAG 234 0.3675 MGFRLPSIIKRESSSKGVDVPKGYQAVYVGEKMKRFVIPISYLSQTSFQELLSQAEEQFGYDHPMGCITIPCREVIS 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03180 77 PANTHER SMALL AUXIN-UP RNA-RELATED 1 75 - -
Tsu02g03180 77 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 75 IPR003676 GO:0009733
Tsu02g03180 77 Pfam Auxin responsive protein 12 75 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03180 Tsu-Chr2 35486292 35486781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03180 19 73 Calmodulin-binding Proteins AT3G43120 56.364 1.33e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03180 K14488 - gmx:100817347 118.242