Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03177 ATGGCGATTCGTTTGCCATTGATCAAGCAAGCTAAGAAGCATATCCTTTGCCGCACACTTTCGAGAGGCAAAAAATTGTTAtccattaataataatataccaaAAGGATATTTGGCGGTATATGTTGGAGAAGAGGAAATGAAGAGATTTGTGGTTCCAATATCATTTTTGCATGAACCTGTTTTTCAGCAATTTCTTTGTAAAGCTGAAGAAGAATTTGGATTTAATCATCCAATGGGTGGTCTCACTATTCCTTGTAGAGAAGATATCTTTGTTAGTGTCACTTCTCAATTGGAAACTTAA 303 0.3399 MAIRLPLIKQAKKHILCRTLSRGKKLLSINNNIPKGYLAVYVGEEEMKRFVVPISFLHEPVFQQFLCKAEEEFGFNHPMGGLTIPCREDIFVSVTSQLET 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03177 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 98 - -
Tsu02g03177 100 Pfam Auxin responsive protein 25 96 IPR003676 GO:0009733
Tsu02g03177 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03177 Tsu-Chr2 35451061 35451363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03177 32 91 Calmodulin-binding Proteins AT3G43120 55.000 1.88e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03177 K14488 - pvy:116143744 132.109