Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03176 ATGCTGTTGTCTCTAGAGGACTTTTTCAAGGATCAACATCAAATCTTTGCTCTGTTGAGtcttttcttctccttcaaacAATCACCAAAAATGGGTTTCCGTTTAAATGTTATTCGACGGGCATCATTAACTTCCATCCAAACAGCATCAAAATCTGCAGAAGTGAGAAAGGGCTATGTTGCAGTGTATGTTGGAGATAAACAGAAGCGGTTTGTGATTCCAATATCATACTTAAACCAACCATTATTTCAAGACTTACTGAGTCAAGCTGAGGATGAGTTTGGATACGATCATCCCATGGGTGGCCTCACCATTCCTTGTACCGAAGACATGTTTCAACACATAACTTCTCGCTTAAATGAGCTATGA 369 0.3767 MLLSLEDFFKDQHQIFALLSLFFSFKQSPKMGFRLNVIRRASLTSIQTASKSAEVRKGYVAVYVGDKQKRFVIPISYLNQPLFQDLLSQAEDEFGYDHPMGGLTIPCTEDMFQHITSRLNEL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03176 122 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 31 120 IPR003676 GO:0009733
Tsu02g03176 122 PANTHER AUXIN-INDUCED PROTEIN 6B 31 120 - -
Tsu02g03176 122 Pfam Auxin responsive protein 42 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03176 Tsu-Chr2 35447190 35447558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03176 44 115 Calmodulin-binding Proteins AT3G43120 45.833 1.62e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03176 K14488 - gmx:100816803 155.221