Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03173 ATGTCGTCTTCAGAGTCAGGTGGAAGAGTGAGTAGCTGTCAAGTTAAAGTGGAAAATCAAGCTCCGTTACCGCTGCCTTCTGATCCTATGACAAATATGCAAACAGATGGAATTAAGCCGCTTTCAGGAAAGCCATACTTTCATGTGATTATTTCAAAAACACATCTCAGACCCCGTTATGCAGTGGGGCCATCTGGCAATATATGCTCAACACTTCCTTCTGTAGCAGTTCCGACTATTCTCAACTGTCGTGGTAAGAGCTGGGAGGTGATTTATAATGgccaaaacagatgcaaacagTTTGATTCCCGTGGCTGGGAAAATTTTGTTAAAGGTAATAATTTGAAGCTTGGAGATGCGTGCGTTTTTGAGCTCATGGAACacggtgaaaaaaaaattgtcttcgAAGTTCAAATTCTTAGAGGTGACTTCCCTAACGAATGCGCTGGTATTGGTGAGAGTGAAGTAGAGCCGATTATCCTATATGATTTTCCTGGAACTGGTGAGAGTGATTCACCATTTGTCATCGACTAG 534 0.3914 MSSSESGGRVSSCQVKVENQAPLPLPSDPMTNMQTDGIKPLSGKPYFHVIISKTHLRPRYAVGPSGNICSTLPSVAVPTILNCRGKSWEVIYNGQNRCKQFDSRGWENFVKGNNLKLGDACVFELMEHGEKKIVFEVQILRGDFPNECAGIGESEVEPIILYDFPGTGESDSPFVID 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03173 177 CDD B3_DNA 79 141 IPR003340 GO:0003677
Tsu02g03173 177 Pfam B3 DNA binding domain 79 136 IPR003340 GO:0003677
Tsu02g03173 177 SUPERFAMILY DNA-binding pseudobarrel domain 44 141 IPR015300 -
Tsu02g03173 177 ProSiteProfiles B3 DNA-binding domain profile. 79 143 IPR003340 GO:0003677
Tsu02g03173 177 SMART B3_2 51 143 IPR003340 GO:0003677
Tsu02g03173 177 Gene3D - 32 143 IPR015300 -
Tsu02g03173 177 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 26 150 IPR044837 -
Tsu02g03173 177 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 26 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03173 Tsu-Chr2 35417641 35419673 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tsu02g03173 B3 1.3e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03173 - - cam:101511251 238.81