Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03150 ATGTCGACGGAGAAGGAGAGAGAGACTCAGGTTTACATGGCCAAGCTTGCTGAGCAAGCAGAGAGATATGAAGAAATGGTTGAGTGCATGAAGACAGTTGCAAAACTTGATGTTGAGCTAACTGTGGAAGAGAGGAATCTCCTCTCAGTGGGATATAAAAATGTCATCGGAGCACGGAGAGCTTCGTGGAGAATTATGTCTTCAATTGAACAGAAAGAAGAGTCTAAGGGAAATGAGAACAATGTGAAACTGATCAAGAGTTATTGCCAAAAGGTTGAGGAGGAACTAGCCAAAATTTGCAGTGACATTCTCACAATTATTGACCAACATCTCATTCCTTCTTCCACCACAGGAGAAGCTACTGTTTTCTACTATAAGATGAAAGGTGACTATTATCGATATCTTGCTGAGTTCAAGAGCGAACAAGATAGGAAGGAGGCAGCTGAGCAGTCACTGAAGGCATATGAGGCTGCTTCAGCATCTGCAAGCACGGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTTTCTGTCTTCTACTATGAGATACTGAACTCTCCTGAAAGGGCCTGTCATTTGGCAAAACAAGCTTTCGATGAGGCAATTGCAGATTTAGATACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAATTGTTGAGAGACAACCTTACACTTTGGACCTCCGATTTACCTGAGGATGGAGGTGAAGAAGTCAAAACAGAAGAAGCCAAACCTGCTGAACCAGAGAACTGA 777 0.4299 MSTEKERETQVYMAKLAEQAERYEEMVECMKTVAKLDVELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIKSYCQKVEEELAKICSDILTIIDQHLIPSSTTGEATVFYYKMKGDYYRYLAEFKSEQDRKEAAEQSLKAYEAASASASTDLPSTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIADLDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEEVKTEEAKPAEPEN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03150 258 MobiDBLite consensus disorder prediction 237 258 - -
Tsu02g03150 258 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Tsu02g03150 258 Coils Coil 13 33 - -
Tsu02g03150 258 MobiDBLite consensus disorder prediction 240 258 - -
Tsu02g03150 258 Pfam 14-3-3 protein 13 235 IPR023410 -
Tsu02g03150 258 SMART 1433_4 7 248 IPR023410 -
Tsu02g03150 258 Gene3D - 1 248 IPR036815 -
Tsu02g03150 258 Coils Coil 138 158 - -
Tsu02g03150 258 PANTHER 14-3-3 PROTEIN 3 250 IPR000308 -
Tsu02g03150 258 PANTHER BNAC03G57490D PROTEIN 3 250 - -
Tsu02g03150 258 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Tsu02g03150 258 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Tsu02g03150 258 PIRSF 14-3-3 1 248 IPR000308 -
Tsu02g03150 258 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Tsu02g03150 258 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Tsu02g03150 258 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Tsu02g03150 258 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Tsu02g03150 258 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Tsu02g03150 258 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03150 Tsu-Chr2 35134834 35138934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03150 2 255 14-3-3 family AT1G26480 84.231 2.29e-163 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03150 - K06630 gmx:100815948 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g03150 02 35134834 35138934 Tsu05g02022 05 23563740 23567917 PCT