Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03126 ATGGTTGGGGGTGGAAATGGAGAGTGGCCTGGTGGTGGTGGGGGGTTTAGTCCTGGTCCCATGACTCTGCTTTCCAACTTGTTTGGCGACAACGATGACGGTAAGACGTTCTCCGAGCTCCTTGCTGGAGCCATGTTGGATGTGGAGCATGGAGGTGGaagaggtggtggtggtggtggtggtttgtTAACAGCTCCACCTCAGCAAGCACAAGGCTACTCCAATGTTCAAATCCAAACTGAACATCCATTTTCTGTATCACTACTGCCTACTACTACCTCATTGACACAAATTCCTGCAGTTACATTCAATAACATTCCACAACAACTGATACCAAACTCTGAGgaatcaaagacaaaattagtCGATTATTCTTCCAACTCAGAACAAAGATTGCAGCAGTCTTCTTTTGTTGAGAAAGCTAATGATGACGGCTACAACTGGAGGAAGTATGGACAAAAACAAGTGAAAGGTTGCGAGTTTCCTCGAAGTTATTACAAGTGCACACATCCTAGCTGTCCTGTGAAGAAGAAAGTCGAACGCGATCCTGTTGACGGTCATGTTACTCAAATTATTTACAAAGGAGAGCACATTCATCAACGTCCTCATCCTAGCAAGCTCACAAAAGAGAATTCAAATGTGCAACAAGATTTGTTAGAAACATGTGACAGTGATGAAGAAGGAGATAATGAAACTGAAGTAGATTATGAACCTGATCTCAAGAGAAGAAACACAGAAGTTAGGCTCCTAGATTCATCGTTTTCACACGGGACTGTCTCAAAGCCTAAAATCATTGTACAAACAACAACTGAGGTGGATCTGTTAGAGGACGGATATAGATGGCGTAAATATGGCCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAATGCACAACCCCAGGTTGCAATGTTCGAAAGCATGTCGAGAGGGCTTCAACGGATCGTAAAGCCGTGATGACAACATATGAAGGAAAACATAATCATGATGTTCCAGCAGCCAAGACTAATAGCCTCACCCTTGCTAGCCATAATAGTGCGTTACAGCAAAAATCACAAAATGTCATACCGGAGATGCATAATATGAACAGAAGGGGTCAGCAGCACCAATCAACGGTGGCACGTCTAAGGTTGAAGGAAGAACATACAGCATAG 1164 0.4184 MVGGGNGEWPGGGGGFSPGPMTLLSNLFGDNDDGKTFSELLAGAMLDVEHGGGRGGGGGGGLLTAPPQQAQGYSNVQIQTEHPFSVSLLPTTTSLTQIPAVTFNNIPQQLIPNSEESKTKLVDYSSNSEQRLQQSSFVEKANDDGYNWRKYGQKQVKGCEFPRSYYKCTHPSCPVKKKVERDPVDGHVTQIIYKGEHIHQRPHPSKLTKENSNVQQDLLETCDSDEEGDNETEVDYEPDLKRRNTEVRLLDSSFSHGTVSKPKIIVQTTTEVDLLEDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDRKAVMTTYEGKHNHDVPAAKTNSLTLASHNSALQQKSQNVIPEMHNMNRRGQQHQSTVARLRLKEEHTA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03126 387 Pfam WRKY DNA -binding domain 143 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g03126 387 Pfam WRKY DNA -binding domain 276 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g03126 387 Gene3D WRKY domain 260 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g03126 387 Gene3D WRKY domain 126 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g03126 387 SUPERFAMILY WRKY DNA-binding domain 267 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g03126 387 MobiDBLite consensus disorder prediction 367 387 - -
Tsu02g03126 387 SUPERFAMILY WRKY DNA-binding domain 141 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu02g03126 387 ProSiteProfiles WRKY domain profile. 270 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g03126 387 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 216 386 - -
Tsu02g03126 387 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 63 216 - -
Tsu02g03126 387 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g03126 387 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 63 216 IPR044810 GO:0003700
Tsu02g03126 387 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 216 386 IPR044810 GO:0003700
Tsu02g03126 387 SMART WRKY_cls 275 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu02g03126 387 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03126 Tsu-Chr2 34833697 34838027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03126 11 41 WRKY Transcription Factor Family AT2G03340 70.968 9.17e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu02g03126 WRKY 2.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03126 - - gmx:100127369 412.92