Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g03089 | ATGACAGAGGTTAAAGACCCTGCGATAAAGCTTTTTGGAAGGACAATTCCTCTTCCACTGATCATTCCTAatgattcttcttcatctccttcttcttctccgCCAGAATTGAGCTCTGCAATACAACAAGAAACTGAGGAACCGTCGAGGAAAGAACTCACGACAACACAAGATGATGATGCCTCACAACAGACCGCAGAGGATTTAAAGTCTCTCACAACATCTTCAGTCATAGTTGAGAATCCTCCTAAGACTCCCTCAGCTGAAACCGAGAATTCATTATTGAAATCTTCTACAAATGGAGAACAAAGCGAGACTAGTGTTTCCGAAGAAAAAACTCTAAAGAAACCCGACAAAATAATTCCATGCCCGCGATGCAATAGTATGGACACCAAATTTTGTTACTTCAACAATTACAACGTCAACCAGCCTCGTCATTTTTGCAAAAAATGTCAAAGATACTGGACTGCAGGAGGAACGATGAGAAATGTTCCTGTTGGTGCTGGTCGCCGCAAGAACAAGAACTTATCTAGCTCGCATTATCGACACTTGATTATTCCAGAGGCCGCTAAACTTAATTCCCCTAATGGATTACATATGGGAAATGGAGCAGCTGTCTTGGCGTTTGATTCAGGTTCACCGCTTTGTAATACCATGGCTTCTGTATTGAACATAGCTGAGAGAACACAAAACTGTGTGCCAAATGGTTTTCATCATGCAAGCTCCTATGGTGGGGAAAATGGTCATTCGAACGGAGTTTCAGTTACAACTTCAACTTCATCAGAGAGGAAAGGCCACACTGACACAAATGGATCAGTGGATAAAAGAATTGAAGGTTTCCCTCCTCAATTGCAATATATTCCAAGTCCCCTTTTGCCTTATCCATGGAGTTCTGCAATGCCTCCTCCTgcattttgtccaccaaactaTCCATTAGCATTCTATACTCCAGTAACTCCACCTGCATATTGGGGTTGTGTTCCACCACCATGGAATATGCCATGTATCTCATCAGAAACTGCTTCTGTTAACCACAGCGACTCTGCTCATAGTTCTGTCCCATATTCACCTACTTTGGGGAAACATTCAAGAGATGGCACCATCATTACCTCAGTCAACTCACAAAAAGAAAAGCCGGATAACGAACACAATAATACCGAAAGTAGTGTTTTGATCCCGAAAACACTTAGATTTGACGACCCAAATGAAGCCGCAAAGAGTTCATTATGGTCAAAGCTTGGGATCAATAATGACAAAGCCAATTCTATCAATGGAGGAGGCATGTTCAATGGATTTCAATCCAAAGGAAAGGACATGAATCACTCGGTCGAAGCGTCGCCGCTGATGTATGCTAACCCTGCAGCTTTATCGCGGTCCCGTACCTTCCACGAGGGAACCTAA | 1401 | 0.4133 | MTEVKDPAIKLFGRTIPLPLIIPNDSSSSPSSSPPELSSAIQQETEEPSRKELTTTQDDDASQQTAEDLKSLTTSSVIVENPPKTPSAETENSLLKSSTNGEQSETSVSEEKTLKKPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNKNLSSSHYRHLIIPEAAKLNSPNGLHMGNGAAVLAFDSGSPLCNTMASVLNIAERTQNCVPNGFHHASSYGGENGHSNGVSVTTSTSSERKGHTDTNGSVDKRIEGFPPQLQYIPSPLLPYPWSSAMPPPAFCPPNYPLAFYTPVTPPAYWGCVPPPWNMPCISSETASVNHSDSAHSSVPYSPTLGKHSRDGTIITSVNSQKEKPDNEHNNTESSVLIPKTLRFDDPNEAAKSSLWSKLGINNDKANSINGGGMFNGFQSKGKDMNHSVEASPLMYANPAALSRSRTFHEGT | 466 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g03089 | 466 | MobiDBLite | consensus disorder prediction | 21 | 44 | - | - | |
Tsu02g03089 | 466 | PANTHER | CYCLIC DOF FACTOR 2 | 1 | 464 | IPR045174 | GO:0003700|GO:0006355 | |
Tsu02g03089 | 466 | MobiDBLite | consensus disorder prediction | 15 | 114 | - | - | |
Tsu02g03089 | 466 | MobiDBLite | consensus disorder prediction | 58 | 107 | - | - | |
Tsu02g03089 | 466 | ProSitePatterns | Zinc finger Dof-type signature. | 123 | 159 | IPR003851 | GO:0003677|GO:0006355 | |
Tsu02g03089 | 466 | MobiDBLite | consensus disorder prediction | 243 | 277 | - | - | |
Tsu02g03089 | 466 | MobiDBLite | consensus disorder prediction | 344 | 365 | - | - | |
Tsu02g03089 | 466 | ProSiteProfiles | Zinc finger Dof-type profile. | 121 | 175 | IPR003851 | GO:0003677|GO:0006355 | |
Tsu02g03089 | 466 | PANTHER | DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN | 1 | 464 | - | - | |
Tsu02g03089 | 466 | MobiDBLite | consensus disorder prediction | 244 | 266 | - | - | |
Tsu02g03089 | 466 | Pfam | Dof domain, zinc finger | 119 | 175 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g03089 | Tsu-Chr2 | 34362775 | 34365809 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g03089 | 4 | 464 | C2C2-Dof Transcription Factor Family | AT5G39660 | 38.780 | 1.24e-85 | 268 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Tsu02g03089 | zf-Dof | 9.2e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g03089 | - | - | gmx:100813315 | 549.28 |