Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03084 atGGAAATTCTTGGTTTAATGATTATAGTTTCCTATATACTTGTTTGGTTTTACTATATCAAATTTTCCATAGCAGCTGATTCTCTTGGTTTGTCACACTCAATCACCAATAATAGTACTTTGGTGTCCCAAAATGGAAGATTTGAACTTGGTTTCTTCACTCCAGGTAACTCTAACAAAACTTACCTTGGTATTTGGTATAAGAATATTCCTGTTCAAAATATTGTTTGGGTTGCAAACAGAAACAACCCTGTCAATAGTACTTCAAACTACGCGTTAATCCTCAACAGCACCGGCAACCTTGTCCTCAGTCAAAATAGCTCATTTGTTTGGTACACAACAACCAACAAAAAACAAGTGCATAATCCAGTGGCAGTGCTCTTAGACAGTGGCAATCTTGTGGTGAAAAATGAAGGAGAAACAAACGAAGAAGAGTATTTATGGCAGAGTTTCGATTATCCAACGGATACCTTTTTAGAAGGGATGAAATTGGGAAGGAATTTAAGAAATGGTCATGATTGGAAATTAACATCTTGGAAGAGTCCTGAAGATCCATCCATTGGAGATGTTTCTTGGGGTTTAGTACTTAATGAGTATCCTGAGTATTATATGATGAATGGAAGTGAAAAAGTTTTCAGGATTGGACCATGGAATGGTCTACACTTTAGTGCATTACCAGAACAAGTTTCAAACTCATTCATACATTACGAGATTGTTTCCAACGATGATGATATCTTCTATTCATATAGCATCGAGATTAATACTGTTATCTCAAAAGTAGTAGTCGATCAAACAAAACAACGTCGTTATGTATGGGATGAACAAGAACATAATTGGAGGACATATGTAACACTTCCCAAAGATTTTTGTGACACTTATGGTCTTTGTGGACCGTATGGAAATTGCATAATGACACAACAACAGGTTTGTCAATGTTTCAATGGGTTTAGTCCAAAGTCACCACAAGCATGGATAGCATCTGATTGGAGTCAAGGATGTGTGCGCGATAAACATTTGAGTTGCAATCACAATCACACAAATAAAGACGGGTTTGTCAAATTTCAAGGCCTAAAAGTTCCGGATACTACACATACTTGGTTGAATGTTAGCATGAATCTTGAGGAATGCAgagaaaaatgtttaaaaaattgttcttgTATGGCTTATACAAATTCAAACATAAGTGGTGAAGGGAGTGGTTGTGTTATGTGGTTTGGTGATCTAATTGACATAAGACAGTTTCAAGATGGTGGACAAGATCTCTATATTCGGATGTTTGGTTCAGACTTAGTCAACAGGAAAGAGCCTGAACACAAGCACAAAAGGAACAACACAGCGGCGAAAGTAGCTACCactgttattttaatttttggggtGCTTTTGGTGTGTATTTATTTAATCTGCAGAGTCCAGAAGATGACTGTAGTTAAAAATCCGGACAGATCGGAAAGGCATGCAGATGATCTTGATCTCCCATTGTTTGACCTGCCAACAATTTCGACTGCGACTAATTGCTTCTCcgaaaacaataaaattggcAAAGGTGGTTTTGGAACTGTGTATAAGGGAAAATTAACCAATGATCAAGAAGTTGCTGTTAAGAAACTTTCAAGCATCTCGGGACAAGGAATGACCGAGTTCATAAATGAATTAAAGTTAATAGCAAAACTTCAACACCGAAATCTAGTAAAGCTACTAGGTTGTTGCATTGAAGGAGAACAAATGTTGATTTATGAATACATGGCTAATGGTAGCCTAGACTCCTTCATTTTTGACATTACTAAGAGTAAATTGTTAGATTGGCCAAAACGGTTCAATATAATTTGTGGAATTGCTAGGGGGCTTTTGTATCTTCACCAAGATTCTCGATTAAGGATTATCCATAGAGACCTCAAAGCAAGTAATGTTTTACTCGACGATAGTTTGAATCCAAAAATATCCGATTTTGGAACAGCTAGAACTTTCGGAGGAGACCATTACGAAGGAAACACAAAGAGAATAATTGGGACTTATGGGTACATGGCACCGGAGTATGCGGTTGATGGATTCTTTTCGGTGAAATCTGACGTTTTTAGCTTCGGAATTTTATTATTGGAGATTATATGTGGCAAAAGAAATAGAGCATATTATCACACAGATGGGACTCTTAACCTTGTTGGCCAAGCATGGTCAGTGTGGAAAGAGAATAGAGCTTTAGAGATTATTGACACAAACATAGGCGAGACTTTTGTGGTATCGGAAGTGTTGCGTTGTATGCACGTTAGTCTCTTGTGTGTACAGCAGAATCCTGAAGATAGGCCTACAATGGCCTCTGTGATTCTAATGTTGGGGAGTACTGAGATGGAATTAGGGGAGCCTAAAGAACCTGGTTTCATTTCCAAAAATGTTTCAACAGAGTCAAATTCTTCTACCAATGCAAAGGATTGTAGTTCAGTAAATGAAGTTACCATTTCCTTATTAGATGCTCGATGA 2472 0.3669 MEILGLMIIVSYILVWFYYIKFSIAADSLGLSHSITNNSTLVSQNGRFELGFFTPGNSNKTYLGIWYKNIPVQNIVWVANRNNPVNSTSNYALILNSTGNLVLSQNSSFVWYTTTNKKQVHNPVAVLLDSGNLVVKNEGETNEEEYLWQSFDYPTDTFLEGMKLGRNLRNGHDWKLTSWKSPEDPSIGDVSWGLVLNEYPEYYMMNGSEKVFRIGPWNGLHFSALPEQVSNSFIHYEIVSNDDDIFYSYSIEINTVISKVVVDQTKQRRYVWDEQEHNWRTYVTLPKDFCDTYGLCGPYGNCIMTQQQVCQCFNGFSPKSPQAWIASDWSQGCVRDKHLSCNHNHTNKDGFVKFQGLKVPDTTHTWLNVSMNLEECREKCLKNCSCMAYTNSNISGEGSGCVMWFGDLIDIRQFQDGGQDLYIRMFGSDLVNRKEPEHKHKRNNTAAKVATTVILIFGVLLVCIYLICRVQKMTVVKNPDRSERHADDLDLPLFDLPTISTATNCFSENNKIGKGGFGTVYKGKLTNDQEVAVKKLSSISGQGMTEFINELKLIAKLQHRNLVKLLGCCIEGEQMLIYEYMANGSLDSFIFDITKSKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDSLNPKISDFGTARTFGGDHYEGNTKRIIGTYGYMAPEYAVDGFFSVKSDVFSFGILLLEIICGKRNRAYYHTDGTLNLVGQAWSVWKENRALEIIDTNIGETFVVSEVLRCMHVSLLCVQQNPEDRPTMASVILMLGSTEMELGEPKEPGFISKNVSTESNSSTNAKDCSSVNEVTISLLDAR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03084 823 ProSitePatterns Protein kinases ATP-binding region signature. 512 535 IPR017441 GO:0005524
Tsu02g03084 823 Gene3D Transferase(Phosphotransferase) domain 1 581 789 - -
Tsu02g03084 823 ProSiteProfiles Protein kinase domain profile. 506 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03084 823 CDD STKc_IRAK 512 776 - -
Tsu02g03084 823 MobiDBLite consensus disorder prediction 793 808 - -
Tsu02g03084 823 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Tsu02g03084 823 Pfam Protein tyrosine and serine/threonine kinase 509 773 IPR001245 GO:0004672|GO:0006468
Tsu02g03084 823 SMART blect_4 32 154 IPR001480 -
Tsu02g03084 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Tsu02g03084 823 Gene3D Hepatocyte Growth Factor 342 423 - -
Tsu02g03084 823 ProSiteProfiles PAN/Apple domain profile. 341 426 IPR003609 -
Tsu02g03084 823 Gene3D - 21 151 IPR036426 -
Tsu02g03084 823 PANTHER - 28 820 - -
Tsu02g03084 823 SMART serkin_6 506 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03084 823 MobiDBLite consensus disorder prediction 787 808 - -
Tsu02g03084 823 Pfam Domain of unknown function (DUF3403) 778 823 IPR021820 GO:0004674
Tsu02g03084 823 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544
Tsu02g03084 823 Gene3D Phosphorylase Kinase; domain 1 469 580 - -
Tsu02g03084 823 Pfam PAN-like domain 345 411 IPR003609 -
Tsu02g03084 823 CDD PAN_AP_plant 338 424 - -
Tsu02g03084 823 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Tsu02g03084 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Tsu02g03084 823 CDD B_lectin 32 154 IPR001480 -
Tsu02g03084 823 SUPERFAMILY Protein kinase-like (PK-like) 489 776 IPR011009 -
Tsu02g03084 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 185 IPR036426 -
Tsu02g03084 823 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 820 - -
Tsu02g03084 823 Pfam D-mannose binding lectin 75 180 IPR001480 -
Tsu02g03084 823 SMART ntp_6 346 425 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03084 Tsu-Chr2 34319004 34322252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03084 454 791 Receptor kinase-like Gene Family AT4G23230 54.839 3.42e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g03084 PK_Tyr_Ser-Thr 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03084 - - mtr:MTR_4g081730 1110.9