Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03082 aTGAATGCTTTAATCTCTAACTCTATTATTCATTTTGCAATGAATTTCATTCCTATTATTCTATTTACTCTTTCTCTTATAGTTTCCAATTCCATAGCCAGTGATAGCACATCATTCATTACTCAATCTCAATCCATCAGTGATGGAAAGACCATTGTTTCACCAAAAGGATTGTTTAAGTTTGGTTTCTTCAGTATTAAAGATCCGAACAAACGCTACCTCGGTATTCAATTCATGAATATTTCAACTCAAAATGTTGTTTGGGTTGCAAATGATGGCAAGCCAATCAATGACTCTTCTGCAGTTCTGAAACTAAATAGTTCTGGCAGTTTGGTCCTTACACACAACAACGATGTTGTTTGGTTCACAAATTCTTCCACAAAAGCACAAAAACCAGTGGCACAACTCTTGGATACTGGTAATCTAGTCATAAAAGAAGATAGTGTTAGTGAAACCTATCTGTGGCAAAGCTTTGATGACCCATCTAATACATTGTTGGCAGATATGAAGTTGGGATGGGACCTTAAAAGAAATTTGAGCAAGTGTCTTGTAGCATGGAAGAGTGATGATGATCCAACACCAGGAGACTTTACTTGGTGTGTGGTATTGAATCCATATCCTGATATCTATATGATGAAGGGAAAAACAAAGTACCACAGACTTGGACCATGGAACGGCTTGCGTTTTAGTGGTATGCTAGAGATGAAGCCTAATCCTGTTTTCAGCTACAAGTTTGTCCACAACAAAGAAGAGGTTTATTACTCATGGAGCTCCAGTGATAGTTCTCTAATATCAACAGTGGTACTTAACCAAACAAGTTACCAACGTCCACGCTATGTATGGTCAAAAACCGACGAATCATGGATGCTTTATTCAAGAATGCCAGGAGATTATTGTGACCTTTATAGTGTATGTGGAGGCAATGGATATTGCAGCAGTACTAATTCACCAATATGTGCATGTTTAAAAGGGTTCAAGCCTAAATTTCCTGAAAAATGGAACTCGATGGACTGGAGTCAAGGATGTGTCAGAAATCACAAATTGAACTGCATCAATGACGGGTTTGTGTCAGTGCAAAACTTGAAAATTCCAGATACTACAAATACTTCGGTGGATGAGAGTATTGGTCTAGAGCAATGTAGAGACAAATGCTTGAAAAATTGTTCATGCATGGCCTATGCAAATACAAATATAAGTTCAGGAAGTGGTTGTGTTATGTGGTTTGGTGATTTAATTGATATCAAACTTTTTCCAGTTGGTGGACAAGTTCTATATATCAGGATGCCTGCTTCAGAATTAGAGGACAAGAGGAACTTGAGAAAAATAGTTGTAACTGCTGTTTCTGCAGCTTCTGGAATGCTTTTACTTGcgatatattttttctacaGATTCCGGAGGAGCATTGTTGGGAAGTCAAAGACTGAAGACGAGTATGAAAGACACGAGAACGATATGGATCTCCCCTTGCTTAATTTGTCAACAATTATTATTGCCACTGACAACTTCTCAGAGAAGAACAAGATTGGAGAAGGTGGTTTTGGACCGGTCTATTTGGGAAAATTAGGAAGTGGGATAGAAATTGCTGTCAAGAGACTTTCACAGAGCTCAAAACAAGGGATGAGAGAATTCATAAATGAAGTAAAACTTATTGCAAATGTTCAGCACCGAAATCTTGTAAAGCTTATTGGTTGTTGCATTCAGAGACATGAAAAATTACTAGTTTATGAATACATGTCTAATGGTAGCCTAGACTACTTCATTTTTGATCGTACCAAAAGTCAATTGCTAGATTGGCCGAAGCGCTACCACATAATTTGTGGAATCGCTAGAGGGGTTATGTATCTTCATCAAGATTCTCGATTGAGGATTATTCATAGAGATCTCAAAACAAGTAATGTTTTACTAGATGATACTTTGAATCCCAAAATATCAGATTTTGGAATGGCTAGAACTTTTGGAGGAAACCAAATTGAAGGAAACACAAATATAATTGTTGGGACATATGGGTACATGGCACCAGAGTATGCTATTGACGGGCAATTTTCAGTGAAATCTGATGTTTTCAGCTTTGGTGTTTTGATATTAGAGATTATATGTGGGAAGAAAAACCAAGTGCATAATCGTGCAAAGAAAACTCTTAACCTTGTTGCTTATgCATGGACATTCTGGAAACACGAAAGAGCTTTACAAATAACTGACTCAAACATCGAGGATTCGATCATCGTATCAGAAGTATCACGTTGCATACATGTTGCACTCTTATGCGTGCAACAATTCCCAGAGGATAGGCCTACCATGGCTGATGTGATTCTAATGTTAGGGAGTGAGATGGCATTGGATGAGCCTAAGGAGCCAGGTTTTATTAAGAGGAGGGAGTCTACTGAAGCAAATTCAAGCTCAAGTGGGAAGGATACAAGTTCAAACTATGAATTGACCATAACCTCTTTAAGTGTTCGATGA 2460 0.376 MNALISNSIIHFAMNFIPIILFTLSLIVSNSIASDSTSFITQSQSISDGKTIVSPKGLFKFGFFSIKDPNKRYLGIQFMNISTQNVVWVANDGKPINDSSAVLKLNSSGSLVLTHNNDVVWFTNSSTKAQKPVAQLLDTGNLVIKEDSVSETYLWQSFDDPSNTLLADMKLGWDLKRNLSKCLVAWKSDDDPTPGDFTWCVVLNPYPDIYMMKGKTKYHRLGPWNGLRFSGMLEMKPNPVFSYKFVHNKEEVYYSWSSSDSSLISTVVLNQTSYQRPRYVWSKTDESWMLYSRMPGDYCDLYSVCGGNGYCSSTNSPICACLKGFKPKFPEKWNSMDWSQGCVRNHKLNCINDGFVSVQNLKIPDTTNTSVDESIGLEQCRDKCLKNCSCMAYANTNISSGSGCVMWFGDLIDIKLFPVGGQVLYIRMPASELEDKRNLRKIVVTAVSAASGMLLLAIYFFYRFRRSIVGKSKTEDEYERHENDMDLPLLNLSTIIIATDNFSEKNKIGEGGFGPVYLGKLGSGIEIAVKRLSQSSKQGMREFINEVKLIANVQHRNLVKLIGCCIQRHEKLLVYEYMSNGSLDYFIFDRTKSQLLDWPKRYHIICGIARGVMYLHQDSRLRIIHRDLKTSNVLLDDTLNPKISDFGMARTFGGNQIEGNTNIIVGTYGYMAPEYAIDGQFSVKSDVFSFGVLILEIICGKKNQVHNRAKKTLNLVAYAWTFWKHERALQITDSNIEDSIIVSEVSRCIHVALLCVQQFPEDRPTMADVILMLGSEMALDEPKEPGFIKRRESTEANSSSSGKDTSSNYELTITSLSVR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03082 819 PIRSF SRK 8 819 IPR024171 GO:0004674
Tsu02g03082 819 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g03082 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Tsu02g03082 819 SUPERFAMILY Protein kinase-like (PK-like) 483 773 IPR011009 -
Tsu02g03082 819 ProSiteProfiles EGF-like domain profile. 295 331 IPR000742 -
Tsu02g03082 819 MobiDBLite consensus disorder prediction 783 819 - -
Tsu02g03082 819 Gene3D Transferase(Phosphotransferase) domain 1 578 785 - -
Tsu02g03082 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 192 IPR036426 -
Tsu02g03082 819 CDD STKc_IRAK 508 773 - -
Tsu02g03082 819 Gene3D Phosphorylase Kinase; domain 1 465 577 - -
Tsu02g03082 819 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 45 817 - -
Tsu02g03082 819 ProSiteProfiles PAN/Apple domain profile. 350 430 IPR003609 -
Tsu02g03082 819 Pfam S-locus glycoprotein domain 220 329 IPR000858 GO:0048544
Tsu02g03082 819 CDD PAN_AP_plant 346 429 - -
Tsu02g03082 819 CDD B_lectin 43 161 IPR001480 -
Tsu02g03082 819 ProSiteProfiles Bulb-type lectin domain profile. 37 157 IPR001480 -
Tsu02g03082 819 Gene3D - 31 158 IPR036426 -
Tsu02g03082 819 Pfam Protein tyrosine and serine/threonine kinase 505 770 IPR001245 GO:0004672|GO:0006468
Tsu02g03082 819 SMART ntp_6 350 428 IPR003609 -
Tsu02g03082 819 SMART blect_4 43 161 IPR001480 -
Tsu02g03082 819 Pfam PAN-like domain 351 414 IPR003609 -
Tsu02g03082 819 MobiDBLite consensus disorder prediction 792 819 - -
Tsu02g03082 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 45 817 - -
Tsu02g03082 819 Pfam D-mannose binding lectin 86 187 IPR001480 -
Tsu02g03082 819 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03082 Tsu-Chr2 34302902 34306731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03082 435 804 Receptor kinase-like Gene Family AT4G23190 50.000 1.52e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tsu02g03082 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03082 - - mtr:MTR_4g081750 1083.94