Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03067 ATGGGAATTGAGAAATATATGGTTGTCTTAAAGTTTAGTTTTTGTGTTCTTTTAGTTCTGCATCTTGTAGCAGCCGTTAGCGTTACAGAAAAGAAGGAAATACAAGATGGTTTTGTTAGAGAACTATTTGATTCAGTATCTGGATTGTTAGACGAGCACACGGCAAAGGTATTAAGGACCACCTGCTGTGAAGATTTTATTCATTTGAAGAAAGAGGTATATCGTGATTTATGCCTCCCACTGGAATTGTTTGCTAGCACCAATAAACTCAGTTCAACAATTCAACCATTTGCACAAGCAGACATCCAAAAATTGCTTAATGGTTGCCATCCTCAAATCAAGGAAAACTTTCTTCattgtttgagaaaaaataatcTTCTATTATTTGTCTCAGGAGAAGACGATGATTCCAAGAAATGGCATGTCACGAATACGGGATATCTTTTTTCCACATCCAGTATTCCTAGAAGAAATCCAGTCCGTGTTTTGCTCCAGACAATATCAGAACCACCTAGTTCAGACCCCGTAGTTGGATCACCTCCACCGAGTCTCACTCCATCGCCTGAACCCAGTCTCGCTCCATCGCCTGAACCCAGTCTCGCTTCATCGCCTGAACCCAGTCTATCTCCATCACCTGCTCCAGTGTCTCTACATCCTAAACCACCATCTCCTTCTTTCTCACCAACTCCATTTTTCCCAAAACTTACACCACCAGCAGCTGCTGATATTTCTGCTCCTCCATCTTCTGACACGGATGGGAACGATGATAAGCATACAAAAAGAACAGTTGTTCTTTCAGTAGTTATAACTATATCGGTGATATTTTTAGCTGGAGCACTGTTCTATTTATGCCTTCGTAAGACTCGTCGGCTTAGACAAAATGATGAGAGACCACTTCTCAGCTTGAGCATGAATGACTATTCTTTTGGTACTTCCAATCATGCTTTTGGGAATTTGACAAAAGGGGAGAAACATGGGTTTCAGTCATCAAGTAATAATTTAGGAGACAACAAGAAGACCTCGCTGCAAGAAAATCAATCAATAGGAGCTCATACTGCTTCCAGATTACCATTTGAATTGACACCTCCTCCTGGGAGAGTGGGAACTGTCCATTCTGGAATGCCACCTTTAAGACCTCCTCCAGGAAGAATGAATCCTCTTCCCCCTGAGCCACCTTCATTTAGGCCTTCTAGTAATACTGCCGTCTCTGCGGCTGCTGTACCTCCTCCTCAACAGTCTGGTGTAGGTAGTGCTCGACCTCCTGCAACTCCTTCCCCACATTCAACACTAGCCGGTGCCAAACCTGCTGCTTCTCGTCCTCCACTACCCCCTGCTCCGTCTGGCGCCAAACCTAGTCCTCCACCACACCCTGCTCCGCCTGGTGCCAAACCTAGTCCTCCTCCACCCCCTGCTCTGCCTGGTGCCAAACCTAGTCCTCCACCACCCCCTGCACCGCCTGGTGCCAAACCTGGTCCTCCTCCCCCACCACCACCAGCACCACATGGTGCTAAACCTGGTCCTCGTCCACCTCCTCTTCCTCCTAAGAATGGTGTAGCTCCTCCTCGTCCTCCAATTGGCCCAAAGGTTGGTGGACTAAAAGCTACAGCGAATGCTGAAGCAGGCGCAGATGGTGGAGCTGATACTTCCAAAGCCAAACTAAAGCCATTTTTCTGGGATAAGGTTCCAGCTAATTCAGATCAATCAATGGTTTGGAATCAGATCAAATCAGGATCATTTCAGTTTAACGAAGAGATGATAGAGACACTTTTTGGTTATAATGCTGTAAATAATGGTCCGCGACAAAAGGAGTCTTCCTCCTCCCAAGACCCTTCACCTCAGTATATCCAGATCGTTGACAAAAAGAAAgcacaaaatttattaattctGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTTGTGATGCACTCTATGAAGGGAATGAGCTACCGTCGGAGTTCCTTCAAACCTTGTTGAAGATGGCGCCAACATCAGACGAAGAACTTAAGCTTAGACTTTTTAGTGGTGATCTGTCTCAACTTGGGCCTGCTGACCGTTTCCTGAAAGCCATGGTTGATATTCCCTTTGCCTTTAAGCGAATGGAAGTACTGCTTTTTATGTGTACATTTAAAGAGGAGCTCACTACTACTATGGAGTCTTTTGCAGTTTTAGAGGTTGCTTGTAAGGAACTAAGAAACAGCCGGCTGTTCCACAAGCTTCTCGAAGCTGTTCTCAAAACTGGAAACCGTATGAACGACGGAACATACCGTGGTGGTGCACAAGCATTTAAACTTGATACACTTTTGAAATTATCCGATGTAAAAGGAACAGATGGCAAGACTACACTCTTACACTTTGTAGTTCAAGAGATTATCCGCTCTGAGGGCATAAAAGCTGCCCGAGCGGCAAAAGAGAGCCAGGGTTTGTCCAATATTAAAACGGACGAGCTTCTTGAAGAGAACACACGTGAAACAGAAGACCACTACCGCGAACTTGGTCTTGAGATGATTTCGCACTTGAGCAGTGAGCTCGAGAATGTTAAGAGAGGTTCCGTTCTAGATGCGGACAGCTTAACAGCTACAGCTACCAAACTTGGCCACGGTCTCGTGAAAGCCAAAGACCTACTGAACAAAAACCTGAAGAATGTGGAAGATGATAGAGGGTTTCGTGAGACATTGGAAAGTCTTGTTCAAAATGCTGAGACTGATGTTAAGAAACTGCTGGAAGATGAGAAGAAAATCATGGCTCTGGTGAAGAGCACAGGCGATTACTTTCACGGGAATGCAACAAAGGACGATGGCTTGCGATTGTTTGTAATAGTAAGAGACTTCTTAATAATGGTGGATAAGGTATGCAAGGAGGTGAGAGATGCACAAAAGAAGTCATCAAAACCTGTAAAACAAGAAACTTCACGAGGATCGTCTTCATCTGATACACGGCCACCACCGTCTGATTTTCGTCAGAGGCTTTTTCCAGCTATCACTGAAAGGAGGATAGATGACCTTAGTTCAGATGATGAGAGTCCATAG 3030 0.4442 MGIEKYMVVLKFSFCVLLVLHLVAAVSVTEKKEIQDGFVRELFDSVSGLLDEHTAKVLRTTCCEDFIHLKKEVYRDLCLPLELFASTNKLSSTIQPFAQADIQKLLNGCHPQIKENFLHCLRKNNLLLFVSGEDDDSKKWHVTNTGYLFSTSSIPRRNPVRVLLQTISEPPSSDPVVGSPPPSLTPSPEPSLAPSPEPSLASSPEPSLSPSPAPVSLHPKPPSPSFSPTPFFPKLTPPAAADISAPPSSDTDGNDDKHTKRTVVLSVVITISVIFLAGALFYLCLRKTRRLRQNDERPLLSLSMNDYSFGTSNHAFGNLTKGEKHGFQSSSNNLGDNKKTSLQENQSIGAHTASRLPFELTPPPGRVGTVHSGMPPLRPPPGRMNPLPPEPPSFRPSSNTAVSAAAVPPPQQSGVGSARPPATPSPHSTLAGAKPAASRPPLPPAPSGAKPSPPPHPAPPGAKPSPPPPPALPGAKPSPPPPPAPPGAKPGPPPPPPPAPHGAKPGPRPPPLPPKNGVAPPRPPIGPKVGGLKATANAEAGADGGADTSKAKLKPFFWDKVPANSDQSMVWNQIKSGSFQFNEEMIETLFGYNAVNNGPRQKESSSSQDPSPQYIQIVDKKKAQNLLILLRALNVTMEEVCDALYEGNELPSEFLQTLLKMAPTSDEELKLRLFSGDLSQLGPADRFLKAMVDIPFAFKRMEVLLFMCTFKEELTTTMESFAVLEVACKELRNSRLFHKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARAAKESQGLSNIKTDELLEENTRETEDHYRELGLEMISHLSSELENVKRGSVLDADSLTATATKLGHGLVKAKDLLNKNLKNVEDDRGFRETLESLVQNAETDVKKLLEDEKKIMALVKSTGDYFHGNATKDDGLRLFVIVRDFLIMVDKVCKEVRDAQKKSSKPVKQETSRGSSSSDTRPPPSDFRQRLFPAITERRIDDLSSDDESP 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03067 1009 MobiDBLite consensus disorder prediction 320 532 - -
Tsu02g03067 1009 PRINTS Proline rich extensin signature 234 251 - -
Tsu02g03067 1009 PRINTS Proline rich extensin signature 194 215 - -
Tsu02g03067 1009 PRINTS Proline rich extensin signature 381 393 - -
Tsu02g03067 1009 PRINTS Proline rich extensin signature 217 233 - -
Tsu02g03067 1009 PRINTS Proline rich extensin signature 179 191 - -
Tsu02g03067 1009 MobiDBLite consensus disorder prediction 374 395 - -
Tsu02g03067 1009 PANTHER FORMIN-RELATED 1 1007 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu02g03067 1009 Coils Coil 890 910 - -
Tsu02g03067 1009 MobiDBLite consensus disorder prediction 968 983 - -
Tsu02g03067 1009 MobiDBLite consensus disorder prediction 437 527 - -
Tsu02g03067 1009 Pfam Formin Homology 2 Domain 547 948 IPR015425 -
Tsu02g03067 1009 SUPERFAMILY Formin homology 2 domain (FH2 domain) 612 972 - -
Tsu02g03067 1009 MobiDBLite consensus disorder prediction 320 352 - -
Tsu02g03067 1009 MobiDBLite consensus disorder prediction 957 1009 - -
Tsu02g03067 1009 Gene3D Formin, FH2 domain 549 979 IPR042201 -
Tsu02g03067 1009 MobiDBLite consensus disorder prediction 168 257 - -
Tsu02g03067 1009 MobiDBLite consensus disorder prediction 991 1009 - -
Tsu02g03067 1009 ProSiteProfiles Formin homology-2 (FH2) domain profile. 543 974 IPR015425 -
Tsu02g03067 1009 MobiDBLite consensus disorder prediction 174 235 - -
Tsu02g03067 1009 PANTHER FORMIN-LIKE PROTEIN 1 1007 - -
Tsu02g03067 1009 SMART it6_source 543 963 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03067 Tsu-Chr2 33975405 33982840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03067 260 1000 FH2 protein (formin) Gene Family AT5G54650 52.412 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03067 - - gmx:100793413 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04542 02 54427148 54431757 Tsu02g03067 02 33975405 33982840 PCT