Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03064 ATGGTaaccaaaattcaaaaccaGTCTCCATTATCACTCTCACCGACATCTCCAACTCCTTCAAAGtTTCGGAATTTTGTGGGAGATAACCATCTCGTAGAAAAAATGGTGGAAACTCCGGTTAATGGAAGAATAAGGCAAGCTTTTACAGTTGTAAATGGCGGGCACGATGTTGGCCTAACTAGTGCTCCTCCGAGCAATGCTGGATCGGATTATGGTATACTCGAGTTCACAAGAGAGGATGTAGAAGCATTGCTAAATGAAAAAGCCAAAAGGAAAGAAAGGTTTAATTATAAGGAAAGATGTGAAAATATGGTGGATTATATAAAAAGGCTCAAGGTTTGTATCAGATGGTTCCAAGACATTGAGATGAGCTACTCTATAGAGCAGGAAAAGTTAAAGAATTCACTGGAAATGACCCAACAAAAAAGTATAGAAATTgAGTTACTGCTTAAGATCAAGGAAGAGGAACTGAATTTAATTATTACAGAAATGAGAAAGAATTGCACTTCTTTACAAGAGAAATTGATAAAGGAAGAAGCAGAAAAGTCGGCTGCAGTTGAATCTCTTGTTAAAGAGAGAGAGGCAAGGCTTGATATTGAAAGGGCACATACCACTCTTTCCGAGGACCTCGGAAGAACTGAACGAGAGATTGAAAGTGCAAATCAGAAGATATCATCACTGAATGAAATGTATAAGCGATTACAAGAATACATAACAAGTTTACAACAGTACAATGGAAAACTTCATACTGAGCTTTCGTCAGTTGAAGATGATCTCAAACGTGTAGAGAAAGAGAAAACTACTGCAGCGGAGAACATCGCAATGTTAAGGGGTCAACTTACTTTATCTATTTCTTCTCAAGAAGAGGCCACAAAGCAGAAGGATGATCTTGCTAGTGAAGTTTATTCTATGAGAGGAGAGTTGAAACAAGTAAGAGATGATAGAGACTGTCAATTATCTCGCGCGCAAACTTTAAATGCTGATTTGATGAAATTAAAAGAATCTAGGGAAAACTCTTCCATTGAATTGGACAGCTTGACTTTAAAAGCAAATGAACTGGAGGAAAAAACTTCTTTGAAAGAGAATCAAATAAAGGCATTGCAAGAAAAGTTAGCAGCTGCAGAGAAGAAATTGCAGGTGACTGATATATCTGTATTTGAGACAAGAACAGAATTTGAAgggcaaaaaaaatttgttgatgaGTTGCAAAGACGCTTGGAAGACACAGAATTTAAACTTATAGAAGGGGAGAGGCTGCggaaaaaattacacaatacCATTTTAGAGTTAAAAGGGAACATCCGTGTATTCTGTCGGGTGAGGCCTTTGTTGTCCGATGAAAGTCGAAGCACAGAAAGCAAGATATTCAGTTATCCAACATCGATGGAAGCTTCTGGACGAGGAATTGATCTATCCCAAAATGGCCAGAAACATTCTTTTACATTTGATAAAGTTTTTATACAAGATGTAtcacaagaagaaatttttgtCGAAGTTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGgtCTGCATATTTGCCTATGGTCAAACAGGATCAGGGAAAACCTATACAATGATGGGAAAACCTGGACATCCAGACGAAAAAGGGTTGATACCTCGTTCGTTAGAACAAATATTTCAAACGAGACAGTCTCAGCAACCTCAAGGCTGGAAATACGAGATGCAGGTGTCCATGTTGGAAATATACAATGAAACAATTCGTGATCTGCTATCTACAAACAGATCATCGCATGATGCAACACGCCTTGAAAATGGTACTCCTGGAAAGCAATATACAATCAAACATGATGCAAATGGAAATACACATGTTTCTGATCTTACAGTAGTAGATGTTCACAGTGCGAAAGAAGTCGCGTTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCATCAAGAAGTCATTTTGTGTTCACTCTTCGAATATATGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTAATTGACCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGTTCAACCGGTGACCGGTTGAAAGAAACACAAGCAATCAACAAAAGCTTGTCATCATTGAGTGATGTCATATTTGCCTTGGCCAAGAAGGAAGATCACGTGCCATTCAGAAACTCAAAGCTTACCTATCTACTTCAACCTTGTCTGGGTGGAGACTCGAAGACGTTAATGTTTGTAAACATTTCACCTGACCCTTCTTCAGTTGGCGAGTCACTATGCTCACTCCGGTTTGCTTCGAGAGTAAATGCTTGTGAGATTGGAACACCTCGTCGTCAAACAAATGGCCGTGCTACAGACTCTCGTTTGAGCTATTTCTGA 2388 0.3781 MVTKIQNQSPLSLSPTSPTPSKFRNFVGDNHLVEKMVETPVNGRIRQAFTVVNGGHDVGLTSAPPSNAGSDYGILEFTREDVEALLNEKAKRKERFNYKERCENMVDYIKRLKVCIRWFQDIEMSYSIEQEKLKNSLEMTQQKSIEIELLLKIKEEELNLIITEMRKNCTSLQEKLIKEEAEKSAAVESLVKEREARLDIERAHTTLSEDLGRTEREIESANQKISSLNEMYKRLQEYITSLQQYNGKLHTELSSVEDDLKRVEKEKTTAAENIAMLRGQLTLSISSQEEATKQKDDLASEVYSMRGELKQVRDDRDCQLSRAQTLNADLMKLKESRENSSIELDSLTLKANELEEKTSLKENQIKALQEKLAAAEKKLQVTDISVFETRTEFEGQKKFVDELQRRLEDTEFKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLSDESRSTESKIFSYPTSMEASGRGIDLSQNGQKHSFTFDKVFIQDVSQEEIFVEVSQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGHPDEKGLIPRSLEQIFQTRQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNRSSHDATRLENGTPGKQYTIKHDANGNTHVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRATDSRLSYF 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03064 795 PRINTS Kinesin heavy chain signature 675 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03064 795 PRINTS Kinesin heavy chain signature 510 531 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03064 795 PRINTS Kinesin heavy chain signature 724 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03064 795 PRINTS Kinesin heavy chain signature 644 661 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03064 795 Coils Coil 204 238 - -
Tsu02g03064 795 Coils Coil 162 182 - -
Tsu02g03064 795 Coils Coil 323 385 - -
Tsu02g03064 795 Gene3D Kinesin motor domain 379 776 IPR036961 -
Tsu02g03064 795 PANTHER KINESIN-LIKE PROTEIN 34 794 - -
Tsu02g03064 795 Pfam Kinesin motor domain 440 772 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03064 795 SMART kinesin_4 432 782 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu02g03064 795 PANTHER KINESIN-LIKE PROTEIN KLP-3 34 794 - -
Tsu02g03064 795 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 772 IPR027417 -
Tsu02g03064 795 CDD KISc_C_terminal 432 776 - -
Tsu02g03064 795 Coils Coil 75 95 - -
Tsu02g03064 795 Coils Coil 246 280 - -
Tsu02g03064 795 MobiDBLite consensus disorder prediction 1 21 - -
Tsu02g03064 795 ProSitePatterns Kinesin motor domain signature. 674 685 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu02g03064 795 Coils Coil 400 420 - -
Tsu02g03064 795 ProSiteProfiles Kinesin motor domain profile. 434 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03064 Tsu-Chr2 33943502 33948337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03064 103 771 Calmodulin-binding Proteins AT5G65930 32.296 4.66e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03064 K10405 - gmx:100784221 1284.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04544 02 54449675 54453880 Tsu02g03064 02 33943502 33948337 PCT