Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03059 ATGGTTAGCAGCAGCAACTCCTCAACTTTAGCTCTGGTGACATTGCCAAAGAAGAGGAAGAATTATGATGTGTTTGTCACCTTCAGAGGTGAAGACACTCGCTACAATATCactgattttctttttaatgcCCTCGAAGATGAAGGCATTTCTGTATTTAGGGATGACACTGATCTTCCAAAAGGTGAATCCATTGGAACCGAGATCCTTCGTGCAATCGAAGACTCTCAGATTTTCGTTGTCATCTTCTCAAAGAACTACGCTTCCTCAACTTGGTGCTTGCAAGAATTGGAAAAGATATGTGAATGCGTTCAAGTGTCTAGGAAACATGTTTTGCCTGTTTTCTATGATGTTGATCCTTCTGAGGTGCGAAAGCAAAGTGGGATTTATGGTGATGCCTTTCTCAAACATGAACGAAGATTCCAACAAGACTATGAGATGGTGCAAAGATGGAGGAAAGCTCTCACACAAGTGGGAAAAATCTCTGGTTGGGATGTGCGTCATAAGCCACAATCAGCACAGATTAAAGAGATTGttcaaagaataataaatattCTGGATTGCGAATTTTCATGTGTTTCAAAAGATCTAGTTGGGATGGATTCTCCTATACAAGAATTACAAAGTAATTTACTTTTGAACTCTCTTGATGATGTTCGGGCTGTTGGAATTTGGGGAATGGGAGGAATAGGGAAGACAACCCTTGTCACTGCTTTGTATGCTAGAGTCTCTAATCAATTTGGCGCATGTTGTTTTATTGATGATGTAAGCAAAGTTTATAGATCACATGATGGTCCATTTGGTTTACGAAAAcaaattttacatcaaactctCGGCAAAGAACACTATAAAATACACAATAATCCTAATGCAATTAATCTGATGCAACGTAAACTAGGTCGTGTAAGGACCCTTCTAATTCTTGATAATGTTGATCATGTTAAGCAACTAGAAATAATACCTGCAAATCGTGAATGGTTAGGTGCAGGTAGTAGAATCATTATCATATCTAGAGATGAACATATCTTGAGAAAGTATGGAGTGGATGTTGTTTACAAAGTTCCACTCTTGAATGAGACTAACTCTCTAGAATTATTTTGCCGACAAGCTTTCAAACTTGATCATATTTTGAATAGTTATGAAGGGTTGGTTAGTAGCATATTGCATTATACCGATGGCCTACCACTAGCAATTGAAGTATTGGGCTCATTTTTATATGGTCTAAATATCTCTGAATGGAGAAGTGCATTGTCTAGATTGAGAGAAAGTCCAGACAAAGATGTCATGGATGTGCTACAAATAAGTTTTGATGGGCTAGACAAGGCGGAAAAAGAAATATTTCTTCACATTGCTTGTCTTTTTAACTTCGTTGTCGCGGATTATGTTAAAAATGTTCTAAATTGTTGTGGATTTTATGCTGATATTGGATTGAGAATTCTCATTGATAAATCACTTATAAGAATTGTGGATGAAACGATTGTAATGCACAATTTATTGGAAGAGCTAGGCAGAAAAATTGTCCAAGAAAATTCAAGCAAAGAGTCAAGAAAGTGGAAAAGGCTGTGGGTTGAGGAACAACTCTACGATGTTATGTCGGACCATATGGAAAAGAATGTTGAAGCCATAGTTTTTACTGAGAAACTTAGTGTAGGGATGAGTTCAGTGATGGATGCAGCGATGGTTGAATACTTTTCAAATCTTAGATTGCTCATCATCGGGTATGTGGGTGAATACGTGAATGCATCAGGAAGCCTCAGTTGTCTTTCTAACGAATTAAGATATGTTGAATGGTTGTATTATCCATTCATGTGTTTGCCATCAAGTTTTCAGCCCATTCAACTTGTTGAGTTGATATTGCATGGTAGTAGCATCGAACAACTATGGAAAGGCAAAAAGTATATGCCCAATTTGAGAAATTTGTGTTTATGCAATTGTGAAAATCTAATAGAGATACCAAATTTTGAAGAGTTCCCGAATCTTGAGCAGTTAAATCTGGAAGGATGTGTAAAACTTGTGAAGTTAGATCCTTCTATTGGACTTCTAAGAAAGATTGTTTACTTGAATTTGGAAATGTGCTCAAGTCTAATAAGCATACCCAACACCATATTTGGGATCAGCTCTCTTAAATACATAAACATGCGTGGATGTTCCAAACTGTCGTTTTACAATCCTGGGCATTTGAATATAATTAAAAGGGCATCACATTCCCAGTCAACTTCTCAATCTTCAAATGTACCACACCGCATTCTCGTTGATTTTTTCCCACTCCTGAGGGCAAAATGGTTATATTTTTTGAGTGCAATTGATATTAGTTTTTGCGGTCTACGCCAAATCCCTGATGCAATTGGATGCCTATGTCAGCTACAAAGTTTAAATCTTGGTGGAAACTATTTTGTGTCACTACTCAGCCTGAATCTGAATGAGCTTTCCAAACTTGTATATTTAAACTTGGATCATTGCATGTTTTTGGAATCTTTGCCTCAACTTCCTTTTCCTACTGCTATCAACTGGGATTTTGGTATTTACAAATTTATAGGATTGCACATTTTCAACTGTCCTAAATTGGGTGAGAGGGAATGTAGAATTGCATTTTCATGGATGAAACAATTTATTCAAGCAAACCCACAATGCCCTCATGCGATTGATATAGTTATTCCTGGAAGTGAAATACCAAGTTGGTTCAACAATCAAAGCGAGGGTGATACAATACTGATGGACAACTCTCCCATTATGCATGACATTAACAATGATATCATTGGCTTTCTATTCTGTTCAGTATTTTCTGTGCCACCTAGTACTCGTCCAATCTATTTCTGCTACCCATATCCGGAAAAAATTAAACTCCGGATTATActtcatttatattttgatggaaCAGTGGACAAGTTGCATTGGCCAGATCATCAAAATGATATTCTAGTAATTTACAAAAAACGAGATCTTATTAAGGTAAAAAGAAATCACATTTGGCTAACCTATTTCCCCCGGAACTTGTCCTTGTATGTTCCGGATTTTCATGGCATAATGGATGTTAAATTTGATAGCCGTTATTATGATTCTGATTCGGGGAATAATGAGGTGAAGAATTGCGGATATGGCTTGCTGCATAAACAGGATCTACAAGAGTTCAACTTAACAACGATGCATCCTGGAAACTCCTCAGCTCTGAAGCACAAGTTTTTGGCAATAGAAGACGAGGCACAACAAGAACATTCACTCATCTGA 3225 0.3653 MVSSSNSSTLALVTLPKKRKNYDVFVTFRGEDTRYNITDFLFNALEDEGISVFRDDTDLPKGESIGTEILRAIEDSQIFVVIFSKNYASSTWCLQELEKICECVQVSRKHVLPVFYDVDPSEVRKQSGIYGDAFLKHERRFQQDYEMVQRWRKALTQVGKISGWDVRHKPQSAQIKEIVQRIINILDCEFSCVSKDLVGMDSPIQELQSNLLLNSLDDVRAVGIWGMGGIGKTTLVTALYARVSNQFGACCFIDDVSKVYRSHDGPFGLRKQILHQTLGKEHYKIHNNPNAINLMQRKLGRVRTLLILDNVDHVKQLEIIPANREWLGAGSRIIIISRDEHILRKYGVDVVYKVPLLNETNSLELFCRQAFKLDHILNSYEGLVSSILHYTDGLPLAIEVLGSFLYGLNISEWRSALSRLRESPDKDVMDVLQISFDGLDKAEKEIFLHIACLFNFVVADYVKNVLNCCGFYADIGLRILIDKSLIRIVDETIVMHNLLEELGRKIVQENSSKESRKWKRLWVEEQLYDVMSDHMEKNVEAIVFTEKLSVGMSSVMDAAMVEYFSNLRLLIIGYVGEYVNASGSLSCLSNELRYVEWLYYPFMCLPSSFQPIQLVELILHGSSIEQLWKGKKYMPNLRNLCLCNCENLIEIPNFEEFPNLEQLNLEGCVKLVKLDPSIGLLRKIVYLNLEMCSSLISIPNTIFGISSLKYINMRGCSKLSFYNPGHLNIIKRASHSQSTSQSSNVPHRILVDFFPLLRAKWLYFLSAIDISFCGLRQIPDAIGCLCQLQSLNLGGNYFVSLLSLNLNELSKLVYLNLDHCMFLESLPQLPFPTAINWDFGIYKFIGLHIFNCPKLGERECRIAFSWMKQFIQANPQCPHAIDIVIPGSEIPSWFNNQSEGDTILMDNSPIMHDINNDIIGFLFCSVFSVPPSTRPIYFCYPYPEKIKLRIILHLYFDGTVDKLHWPDHQNDILVIYKKRDLIKVKRNHIWLTYFPRNLSLYVPDFHGIMDVKFDSRYYDSDSGNNEVKNCGYGLLHKQDLQEFNLTTMHPGNSSALKHKFLAIEDEAQQEHSLI 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03059 1074 Gene3D - 188 351 IPR027417 -
Tsu02g03059 1074 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 164 IPR035897 -
Tsu02g03059 1074 Gene3D Ribonuclease Inhibitor 750 855 IPR032675 -
Tsu02g03059 1074 Pfam NB-ARC domain 205 426 IPR002182 GO:0043531
Tsu02g03059 1074 PRINTS Disease resistance protein signature 298 312 - -
Tsu02g03059 1074 PRINTS Disease resistance protein signature 221 236 - -
Tsu02g03059 1074 PRINTS Disease resistance protein signature 391 405 - -
Tsu02g03059 1074 PRINTS Disease resistance protein signature 807 823 - -
Tsu02g03059 1074 Pfam C-JID domain 885 1040 IPR045344 -
Tsu02g03059 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 450 IPR027417 -
Tsu02g03059 1074 ProSiteProfiles TIR domain profile. 20 186 IPR000157 GO:0007165
Tsu02g03059 1074 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 942 IPR044974 GO:0006952
Tsu02g03059 1074 SUPERFAMILY L domain-like 497 833 - -
Tsu02g03059 1074 Gene3D - 356 440 IPR042197 -
Tsu02g03059 1074 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 942 - -
Tsu02g03059 1074 Gene3D - 16 187 IPR035897 -
Tsu02g03059 1074 Pfam Leucine Rich Repeat 613 632 IPR011713 -
Tsu02g03059 1074 SMART till_3 21 161 IPR000157 GO:0007165
Tsu02g03059 1074 Gene3D Ribonuclease Inhibitor 548 744 IPR032675 -
Tsu02g03059 1074 Pfam TIR domain 21 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03059 Tsu-Chr2 33911669 33915382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03059 20 827 WRKY Transcription Factor Family AT4G12020 28.727 1.02e-80 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03059 - - mtr:MTR_6g488300 1116.29