Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g03039 ATGGCCACCTTCATTTTAAGGTCTAATAAACTAGTCCATGCATTGAGCTGGTTTTGTGTCATGCTAATGATTCATAAGAGTTCTGCCTATGATTTCATTGTTGGTGGCCAAAAGGGTTGGAGTGTTCCAGGTGATTCCAATGCCAATCCTTTCAATCAATGGGCAGAAAAGAGCCGTTTTCAAATTGGAGACTCCCTAGTGTTCAATTACCAATCTGGCAAAGACTCAGTGCTATATGTGAAGAGTGAAGACTATGCAAGTTGCAACACTGGTTCACCTAATGCAAAATTCTCTGATGGTCACACAGTCTTCAAACTGAACCAATCAGGACCTCATTTCTTCATCAGTGGAAACAAAGACAACTGTCTCAAAAATGAGAAGGTAACGATTATTGTTCTATCTGACAGGAGCAACAGCAACAGCAACAGCAACACCAACCAAACAAGCAATGCTACTCCACCTTCaccacaatcatcatcatcacctcCTTCACCAGCACCTTCTAAACAAGAGGGTCAATCTCCACCTCCAGACACAAACCAAACACCACCTCCTACTACTGCTAGTGATCGTGATCATCCTCCTCGTAATGGTGCTGCTTCGGTTTTTGTCAACCTAGCTGGATCTATTGGAACATTCATGGCTTCAGTTCTAATTTTATCTAAATATGTATGA 675 0.4044 MATFILRSNKLVHALSWFCVMLMIHKSSAYDFIVGGQKGWSVPGDSNANPFNQWAEKSRFQIGDSLVFNYQSGKDSVLYVKSEDYASCNTGSPNAKFSDGHTVFKLNQSGPHFFISGNKDNCLKNEKVTIIVLSDRSNSNSNSNTNQTSNATPPSPQSSSSPPSPAPSKQEGQSPPPDTNQTPPPTTASDRDHPPRNGAASVFVNLAGSIGTFMASVLILSKYV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g03039 224 MobiDBLite consensus disorder prediction 134 199 - -
Tsu02g03039 224 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Tsu02g03039 224 MobiDBLite consensus disorder prediction 156 183 - -
Tsu02g03039 224 Pfam Plastocyanin-like domain 45 124 IPR003245 GO:0009055
Tsu02g03039 224 CDD OsENODL1_like 30 133 IPR041846 -
Tsu02g03039 224 MobiDBLite consensus disorder prediction 134 155 - -
Tsu02g03039 224 Gene3D - 30 146 IPR008972 -
Tsu02g03039 224 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Tsu02g03039 224 PANTHER BLUE COPPER PROTEIN 5 221 IPR039391 GO:0009055
Tsu02g03039 224 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g03039 Tsu-Chr2 33610136 33611590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g03039 11 201 Phytocyanin Superfamily AT3G20570 46.073 4.35e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g03039 - - gmx:100781182 305.064