Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02997 ATGGAGGGGACACGAGAAGATGCACGGCTGGGAGAGCAAAGGGAATCCAATGTGTCACGGTGGACGTCAGATTTCGTTGAAAAATTTGGATCTGTTTCTTTGGAAACTCAAGATGAGACCTTAAATAATAAAGAATCACCAAGACATTCTAACCAATATTTTATGACACCTCAAAGGGCATCGCAAATTCTATGGCACACTGGAATGCTTTCAGAACCGATACCAAATGGTTTTTACTCCGTTGTTCCGGAGAAAAGGCTCAAGAAACTTTTTGATAGTATTCCTACTTTGGATGAGCTTCAAGCTTTAGGTGGAGAGGGTTTTAGGGCTGATGTCATTGTTGTGGATGCAAAGAAAGATAGAAAGTTATCTATGTTGAAGCAACTAATTGTCACATTGGTTAAAGGGTTGAATGCAAATCCAGCTGCAATAATTAAGAAGATAGCTGTATTAGTTTCTGATTTCTATAAGCGACCAAATGTAGAAAGTCCAGCAAAAGCTGCACTTGAGGAATCCTCACACATGTTTGAGAGTCACGGTATCCAGATGCTGGGGCAAATAAGGCATGGTTCATGCCGTCCTCGAGCCATCTTATTTAAAGTATTGGCAGATACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTTCCAACTGATGGGGCTGCCGATTGTGTAGACTCATACAAGCATATGTCTGTGATAGTTGCATTAGACTCTGTGGAACTGCTGGTTGATCTTATGCGCTTTCCTGGCCAATTGTTACCTCGATCAATCAAGTCAATTCTTATGACACACATTTCTGCAGCAGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCTTTATATGGGGTTTCAGAGAGTGCTGAAAAAGATGAGAGTCTCCAATTCCATAGAAGATTTGAAGCATCTTCAAATGTAACAGGTCCTCCCTTGCGAAACATGATGTTACGATCAAATACCATGGACAGGAAACTAAGTGAACCAAACATTGCAACTTCATTTGGTCGGCGTAGTCGAAGAAAGGTCATTGCTGAACAGAGGACTGCTAGCTCAAGTCCCGAACATCCATCATTTCAAGCTCGTGGACAGTCGAAGCTTGGCGGTGACAAGACTGCATTTAGAGGTTTTGCTGATGACCAGGCTACATCAAGATCCAGCTCATCAGAAACTCGTAGAATACGAAGAAGAAGCCTCAGTATTACACCAGAGATTGGTGATGATATTGTAAGGGCTGTGCGAGCAATGAATGAAAAACTAAAGCAAAATCATCTTCTAAAGGAACAAGGGGATGATAGTTCTTTGTCTCATTCTCCCAGTGATAGAATTAGCAGTGCAGAGCTTCAGAAAAATCTGTCAAATTTTTGTCTTGATGGTCATCATGAAACGTCCCCCTTATTTCCGCTGCACCGTGACAATATAACTTCGAAGGCAATGTCATTACCCTCTTCACCACATGATTATCGAGGACAAACTTCTGAGACAAGCAGGCCGTCGGGATATGAATTGAGTGATGAACTAGAGTCAACTTGGAATAAAATCCTTGAATCGTCAATGGCAAATAATAAACCCCTGTTACCATATGAAGAATGGAATATTGATTTCTCAGAATTGACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTGTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTTTGCAATGAGATATCTATTCTCAGGTATTTTGTGATGATTTTCTTCATCTTATTTCTGGGCGCATGCACAAAGCCTCCACGCTTGTCAATGGTGACCGAATACATGGAAATGGGATCTTTGTTCTACTTGATTCATGTGAGCGGTCAAAAGAAGAAGCTTAGTTGGCGAAAAAGACTAAAGATGCTGCGTGACATATGCAGTAGGGGCTTGATGCATATACATCGAATGAAGATTATTCACCGTGATGTGAAAAGTGCGAATTGCCTTGTGGATAAGCATTGGACAGTGAAAATCTGTGATTTCGGACTTTCAAGAATAATTACAGATTCTCCCATGAGAGATTGTTCTTCAGCTGGAACACCAGAATGGATGGCTCCTGAACTGATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTAGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGGCCGTGGGAAGGCGTACCTCCAGAGAGGGTGGTTTATACTGTTGCTAATGAGGGTTCCAGATTGGAGATTCCTGAAGGCCCACTAGGCAGGCTGATTTCAGAGTGTTGGGCAGAACCGAATGAGCGACCAAGTTGTGAGGAGATCCTATCTCGCTTGGTGGACATCGAGTACTCAATGTCTTGA 2412 0.4204 MEGTREDARLGEQRESNVSRWTSDFVEKFGSVSLETQDETLNNKESPRHSNQYFMTPQRASQILWHTGMLSEPIPNGFYSVVPEKRLKKLFDSIPTLDELQALGGEGFRADVIVVDAKKDRKLSMLKQLIVTLVKGLNANPAAIIKKIAVLVSDFYKRPNVESPAKAALEESSHMFESHGIQMLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPTDGAADCVDSYKHMSVIVALDSVELLVDLMRFPGQLLPRSIKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESAEKDESLQFHRRFEASSNVTGPPLRNMMLRSNTMDRKLSEPNIATSFGRRSRRKVIAEQRTASSSPEHPSFQARGQSKLGGDKTAFRGFADDQATSRSSSSETRRIRRRSLSITPEIGDDIVRAVRAMNEKLKQNHLLKEQGDDSSLSHSPSDRISSAELQKNLSNFCLDGHHETSPLFPLHRDNITSKAMSLPSSPHDYRGQTSETSRPSGYELSDELESTWNKILESSMANNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILRYFVMIFFILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRKRLKMLRDICSRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITDSPMRDCSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVANEGSRLEIPEGPLGRLISECWAEPNERPSCEEILSRLVDIEYSMS 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02997 803 SMART serkin_6 546 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02997 803 CDD STKc_MAP3K-like 552 795 - -
Tsu02g02997 803 MobiDBLite consensus disorder prediction 272 297 - -
Tsu02g02997 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Tsu02g02997 803 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 801 - -
Tsu02g02997 803 Pfam Protein tyrosine and serine/threonine kinase 547 795 IPR001245 GO:0004672|GO:0006468
Tsu02g02997 803 MobiDBLite consensus disorder prediction 354 368 - -
Tsu02g02997 803 MobiDBLite consensus disorder prediction 328 405 - -
Tsu02g02997 803 Gene3D Phosphorylase Kinase; domain 1 539 624 - -
Tsu02g02997 803 SUPERFAMILY Protein kinase-like (PK-like) 521 795 IPR011009 -
Tsu02g02997 803 Gene3D Transferase(Phosphotransferase) domain 1 625 802 - -
Tsu02g02997 803 ProSiteProfiles Protein kinase domain profile. 546 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02997 803 MobiDBLite consensus disorder prediction 328 342 - -
Tsu02g02997 803 MobiDBLite consensus disorder prediction 486 509 - -
Tsu02g02997 803 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 801 - -
Tsu02g02997 803 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Tsu02g02997 803 ProSitePatterns Protein kinases ATP-binding region signature. 552 573 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02997 Tsu-Chr2 33062889 33075926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02997 1 802 MAP Kinase Kinase Kinase AT3G58640 67.312 0.0 1096
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Tsu02g02997 PK_Tyr_Ser-Thr 1.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02997 - - gmx:100807193 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02997 02 33062889 33075926 Tsu02g02997 02 33062889 33075926 ECH