Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02989 ATGAAGAGAATCGATTACGATGTAGGAGACAAAGTAGAAGTGTGTTGCAAAGAAGAAGGGTTTGTTGGATCATACTTCGAAGCCACAATTGTTTCATGTCTTGATAATGGAAAATATGTTGTTCGATACAAGAACCTTCTTAAAGATGACGAGTCTGAACTTCTCACTGAGACATTCTTTCCAAAGGATCTTCGTCCACTACCGCCACGTGTTCGTAATCCTCCCTATTTCAAACTTAATCAAAAAGTGGATGTTTTCGATAAAGATGGCTGGTGGGTAGGGGAAATTGCAAGCGAGAAGATCCGCATGCAAAACACTTATTACTATAATGTGTATTTCGAATATTATCATCAATCCATTTACTACCCTTGTGATCAAATTAGGGTTCATCATGAGTTGTCGTTTAGTGGAGAGTGGATCTTGGAAGCTTAA 432 0.3843 MKRIDYDVGDKVEVCCKEEGFVGSYFEATIVSCLDNGKYVVRYKNLLKDDESELLTETFFPKDLRPLPPRVRNPPYFKLNQKVDVFDKDGWWVGEIASEKIRMQNTYYYNVYFEYYHQSIYYPCDQIRVHHELSFSGEWILEA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02989 143 SMART agenet_At_2 4 72 IPR014002 -
Tsu02g02989 143 SMART agenet_At_2 75 135 IPR014002 -
Tsu02g02989 143 Pfam Agenet domain 9 69 IPR008395 -
Tsu02g02989 143 PANTHER - 5 141 - -
Tsu02g02989 143 Gene3D - 1 68 - -
Tsu02g02989 143 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02989 Tsu-Chr2 32963385 32963816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02989 18 103 PHD Transcription Factor Family AT5G58610 34.513 1.28e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02989 - - mtr:MTR_4g079980 194.512