Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02984 ATGGAGAATAATGATGAAGAGCATATGCAGATGGATGAATCTGTTGCCTCTATGGAGGGACTAGAAGACTTGTCAGTTGGGGTAAGTAGTGATGAAGCACCATGTGACACCACTAACGATGATGCCATTAGTGTTGAGGCTAGGGAAGGcaccgatttttttttaaatattgatagTATGGAGGATATTCTTAGCATGAACCTGAAGGGGTTAAGTCCCCATGAGACAAGGAAATTTCAGTTTTCAAGCTTGGAAATGGCTTATGAGTTCTACAATCAGTATGCTAGAATGAATGGGTTTGCTGTCCGCAAGAGCAAGATACTCCGAAGCAAGAAAGGGGAAATATTACAACGAACGTTTGTCTGCCACAGACAAGGGTTTAGGGAGGATAGAGGTTTAACAACAGAAAATCGTAAGCGTGAGCCTAAACCTGAGACTCGGAGTGGATGTGAAGCAAAATTTAGAGTTCATGTAGATATTTTATCACATCGTTGGCAGATAACTGTTTTTACAGATCAACATAACCATGATCTTTTGGATGAAAAGTACTGTCGAATGCTACCTGCACATCGAAGAATGAAAGAGTCAGACACAGTGCAGATGAACGATATGTTGAAGGGTGGTATAGGTCCGTCTCAATTCTATGCTTCTATGGCGAACCAAGCAGGAGGTTATGAAAAGATAGGGTTTCGTAGGAAGGATGTATATAATCAGATAGGAAAACAACGTCGTTTGAAACATTGTGATGGTAAAAATGCTTTACGTTATCTTCGTGGGCTGGCATCCGATGACCCGATGATGTTTTATCGCCACACCGTCGACGGGGAAGGCAGGCTTGAACACTTGTTTTGGTGTGATGGTATTAGCCAAATGGACTACCAAGTTTATGGTGATGTGTTGGCATTTGATGCAACCTATGGAAGGAATAAATATCACTGCCCCTTATCACCAGTTAGCCGATCTTCATCAGAATACAATGTTGACAATGTCATCTTTCTATCGGACGATGATGACATGGACAAGACAAAAGCATCAGCAAATATGTCTAACATTCATTCAACCTGCTCAAAGGGAAGCAAGGTACAAAATCCGTTTACCAACTTCGTAACCACAGAAGAAATGAAACTCCAACCAGTGGAAGAACATGTTTCATGCTATGTTTTTAATGTTAACAATGATCTCAGTGAGGAATTGTTCAAGGTTGAAACCCTCAAAGGCTCACGAAAGGAATTTCAAACTTTGTGTCCTGGAAGAATAATTGATAATGAGATAATTCACATGATGTCCTTTAAGATGAACTGGATAGAGAAGAATGCTGCATCACAGACTATATGGTCACTCCCCCCCTCGTTTGTGAGAGATGTATACTGCGGTTTGACAATTGAAGAACTCATCAAAAAGTATGGGAAAAACTGGATGCCCCATTTCGAGAACCTAAAACATATTTATCTTCCAATCGAAGATTGTGTTGGAAATTGGTTTTTGATGGTTGCCGCCATTGATGACCAAGTGTTGTATCATCTAGATCCTGGTTTCGAAAGAAGAAATATTATACCTAGACAACTGGTCATTAAGAAAATGTGGCAAGTTATTACCAAAATGGTCCAAACTATGGTGGAAACTAATTACTTTCCACCGGAGTTTCTATGTGAAGTGCATCAGACCATAGACATTTGGGATACGGCTGAACCCGTAGGACTTGTTTCTGAAGGATTTTgTCAGCACTCTGCGGTGTGGGTCTTACAGTGGCTAGCAATGGGTTCGTCATTCACACCTAACATTCATGTCATGTTGAAAGAAGACGTTGTCAGAATGAAGGCGGCGATGGATTTGTTGTTGGGGGACCACAACGAATATAAAAGCATCCTAGTGGAAAAGGCTGAAGAGGCTTGGAACAATATGAATGCCTAG 1911 0.4055 MENNDEEHMQMDESVASMEGLEDLSVGVSSDEAPCDTTNDDAISVEAREGTDFFLNIDSMEDILSMNLKGLSPHETRKFQFSSLEMAYEFYNQYARMNGFAVRKSKILRSKKGEILQRTFVCHRQGFREDRGLTTENRKREPKPETRSGCEAKFRVHVDILSHRWQITVFTDQHNHDLLDEKYCRMLPAHRRMKESDTVQMNDMLKGGIGPSQFYASMANQAGGYEKIGFRRKDVYNQIGKQRRLKHCDGKNALRYLRGLASDDPMMFYRHTVDGEGRLEHLFWCDGISQMDYQVYGDVLAFDATYGRNKYHCPLSPVSRSSSEYNVDNVIFLSDDDDMDKTKASANMSNIHSTCSKGSKVQNPFTNFVTTEEMKLQPVEEHVSCYVFNVNNDLSEELFKVETLKGSRKEFQTLCPGRIIDNEIIHMMSFKMNWIEKNAASQTIWSLPPSFVRDVYCGLTIEELIKKYGKNWMPHFENLKHIYLPIEDCVGNWFLMVAAIDDQVLYHLDPGFERRNIIPRQLVIKKMWQVITKMVQTMVETNYFPPEFLCEVHQTIDIWDTAEPVGLVSEGFCQHSAVWVLQWLAMGSSFTPNIHVMLKEDVVRMKAAMDLLLGDHNEYKSILVEKAEEAWNNMNA 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02984 636 Coils Coil 624 636 - -
Tsu02g02984 636 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Tsu02g02984 636 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 60 483 - -
Tsu02g02984 636 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 483 IPR031052 GO:0006355
Tsu02g02984 636 Gene3D Adenoviral Proteinase; Chain A 367 560 - -
Tsu02g02984 636 SUPERFAMILY Cysteine proteinases 390 537 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02984 Tsu-Chr2 32890327 32900560 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g02984 FAR1 5.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02984 - - mtr:MTR_1g070355 856.67