Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02977 ATGCAAAATGTTGACTTGTTGCAATCACACCTAGCAAATGTTCACATTACCATAGAAACAGATTGTCTGCAGTTAGTACAAGTTATCCATGCAAGGCCTGTTAACATGACAACATTTGGGAGAATTACTGATTTTTGCCATAACTTATTAGTTGAGAATGATCATTaccatttcttcttcttctttctctattGCGGCAGGAAAATGTCTCATCGGAAATTCGAGCACCCTAGACATGGTTCTCTCGGTTTTCTCCCAAGGAAGCGAGCTTCACGTCATCGCGGAAAAGAACAAGAAATTGTTAATCTGAAGAAAACAAGGCAGCGAGGCTTTTCTTTATCCAAGAAGTCTGCAAGAAAACAAGAGTATAAGGAGCTTGCAGTGTGGGATGGGAACAGTGTTCCTAGTGTGTCTGAATCTGAATGGGAGCTTCTGTAG 438 0.3881 MQNVDLLQSHLANVHITIETDCLQLVQVIHARPVNMTTFGRITDFCHNLLVENDHYHFFFFFLYCGRKMSHRKFEHPRHGSLGFLPRKRASRHRGKEQEIVNLKKTRQRGFSLSKKSARKQEYKELAVWDGNSVPSVSESEWELL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02977 145 Pfam Ribosomal protein L3 69 97 IPR000597 GO:0003735|GO:0005840|GO:0006412
Tsu02g02977 145 MobiDBLite consensus disorder prediction 76 99 - -
Tsu02g02977 145 Gene3D Ribosomal protein L3, domain 3 69 130 IPR044892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02977 Tsu-Chr2 32828552 32834281 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02977 69 96 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 100.000 3.49e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02977 K02925 - ncol:116267275 67.0106