Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02962 ATGAGGAGCACAACCGGAGGAGAGATAGTTCAAGTAGAAGGAGGTCACATAGTTCGATCCACCGGTAAAAAAGATCGACACAGCAAGGTTTACACATCGAAAGGACCTCGTGATCGTAGGGTTCGTCTCTCAGCACATACAGCCATTGAATTCTACGATGTTCAAGATCGCCTTGGCTACGACAGACCAAGTAAAGCAGTGGACTGGCTCATCAAGAAAGCAAAGTCATCCATTGACAAACTCGCCAAGCTTCCTCCATGGCATCCTATCGGCgaaaatcaaacactaaaatcTCAAGAAGAGCAGAATGCAGCTACAGACACAACTGGTATGGTTATTGGAGAATCATCAGAATCTAATGGTTACAGTTTTCATCTCTTAAGTCAAATAAGTGAGAATCAAGGTAACAATAATTCATCTTTCATTTCAGCACATGATGTTGAAACAAATCCTATACATTCTTCATCCATCAATTTCCAAAACTACCCTTCTGAAAACCTTGGTCTCTCTCTTCATTCCTTCCAAGATCACAATGGTTTCATTCCTTGGCAATCACAACAAGTATGTGAAAACCATGAAACTTCAAATGCAAACCAAAACCAAACACCTTTTGAGAATCAATATCAAAGAATTGTGAATTGGAACAATGAAACAACCAATGattatataaagaaagttgGATTCATGGTAAACTCAAATAATCCATTTCTAGGTCAAGGTTCAGGTTCCGGTTCAGAATACTCACCAAATGCGACAATTGAGTCGAATTTTTCACATTCGGTTAGAACATGGAATGAAATTCCTATGGCTGATTCTTCTTCAGAGATTCATCATCACAGGTCTCAACAAGTTCATCAAGCTTCAATCTTTGGAAACAGGTTTGGTTGTGATGGATTAGCAGGGTTCTACATTGCTGATACAGTTCAAGGTGGTGAAGAGGGTCATGGAGTTTCTTCTAATAGGCATTCTCCTAACAACAATTGA 984 0.3852 MRSTTGGEIVQVEGGHIVRSTGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKSSIDKLAKLPPWHPIGENQTLKSQEEQNAATDTTGMVIGESSESNGYSFHLLSQISENQGNNNSSFISAHDVETNPIHSSSINFQNYPSENLGLSLHSFQDHNGFIPWQSQQVCENHETSNANQNQTPFENQYQRIVNWNNETTNDYIKKVGFMVNSNNPFLGQGSGSGSEYSPNATIESNFSHSVRTWNEIPMADSSSEIHHHRSQQVHQASIFGNRFGCDGLAGFYIADTVQGGEEGHGVSSNRHSPNNN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02962 327 ProSiteProfiles TCP domain profile. 23 81 IPR017887 -
Tsu02g02962 327 Pfam TCP family transcription factor 21 145 IPR017887 -
Tsu02g02962 327 PANTHER TRANSCRIPTION FACTOR TCP4 2 323 - -
Tsu02g02962 327 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 323 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02962 Tsu-Chr2 32625625 32626877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02962 7 316 TCP Transcription Factor Family AT1G53230 37.536 1.17e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu02g02962 TCP 9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02962 - - gmx:100814907 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02962 02 32625625 32626877 Tsu02g04320 02 51719162 51720913 ECH
Tsu02g02962 02 32625625 32626877 Tsu02g02962 02 32625625 32626877 ECH