Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02958 ATGGCTCAATTGCCACCAAAGGTTCCAATTCCAAACATGACACCAACTTGGCCTGAATTTTCTTCACACCAAAAATTACCTACCCTTAAAACGTTATTGTCACCAAAtgcttcaaattttcaaaataatcaacaaaatcCTTCATGGGTGGATGAGTTTCTAGACTTCTCGTCCGCCAGACGAGGAGTCCATAGACGGTCCGCGAGCGACTCGGTGACCTTTGTAGAGACATCAATGATGGAACATTGTCGTCGTAGAGATGGTGACAATgagtttgaaagatttgatGATGAACAATTGATGTCTATGTTTGGTGTAGACGAGGTTTCGGGGAAAAACATGATGCCGCCGCCACCAACAACAGCTGCATTGTCTTCTAACTCTAACCCTTCAACTCCTTCCGATCATAACAGCATCAATGATGACAAAGAAGAAGGGGAAGAGGAGGAAAAACAGCAACAATTGAAGCATGAATTGGATGAAGATGAAACTAGTGAAGGAAAACAAGAAATTGCACGAATTgtcaatgatgatgatgatgatgacagtAATGCAAATAGAACAAATTTTTCAAGTCAGAAAATTACAGACCCCAAGAGGGTAAAAAGAATCTTGGCAAATAGACAATCTGCACAAAGATCAAGAGTAAGGAAATTACAATACATATCAGAACTTGAACGAAGTGTGTCTTCATTACAGgCTGAAGTATCAGTACTGTCACCAAGAGTTGCATATTTGGATCATCAGAGGTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCAGCACTTGCTCAAGACAAAATCTTCAAAGATGCTCATCAAGAAGCATTGAAGAGGGAGATAGAGAGGCTGAGGCAAGTGTATCATCAACAAAACAACatcaagaataataataatgctaCAGTAGTATCATCACAATCTCCATCATCTAAACCACATTGTGATAATGATACTCACATTGAAAATGAACATCTTATCAATGTTTGA 999 0.3614 MAQLPPKVPIPNMTPTWPEFSSHQKLPTLKTLLSPNASNFQNNQQNPSWVDEFLDFSSARRGVHRRSASDSVTFVETSMMEHCRRRDGDNEFERFDDEQLMSMFGVDEVSGKNMMPPPPTTAALSSNSNPSTPSDHNSINDDKEEGEEEEKQQQLKHELDEDETSEGKQEIARIVNDDDDDDSNANRTNFSSQKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVSSLQAEVSVLSPRVAYLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNNIKNNNNATVVSSQSPSSKPHCDNDTHIENEHLINV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02958 332 MobiDBLite consensus disorder prediction 318 332 - -
Tsu02g02958 332 Coils Coil 278 298 - -
Tsu02g02958 332 MobiDBLite consensus disorder prediction 298 317 - -
Tsu02g02958 332 MobiDBLite consensus disorder prediction 149 185 - -
Tsu02g02958 332 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 327 - -
Tsu02g02958 332 MobiDBLite consensus disorder prediction 298 332 - -
Tsu02g02958 332 Pfam bZIP transcription factor 199 246 IPR004827 GO:0003700|GO:0006355
Tsu02g02958 332 Gene3D - 198 297 - -
Tsu02g02958 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700|GO:0006355
Tsu02g02958 332 MobiDBLite consensus disorder prediction 108 196 - -
Tsu02g02958 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 249 IPR004827 GO:0003700|GO:0006355
Tsu02g02958 332 PANTHER BASIC LEUCINE ZIPPER 34 1 327 - -
Tsu02g02958 332 MobiDBLite consensus disorder prediction 1 21 - -
Tsu02g02958 332 SMART brlzneu 195 259 IPR004827 GO:0003700|GO:0006355
Tsu02g02958 332 SUPERFAMILY Leucine zipper domain 199 253 IPR046347 GO:0003700|GO:0006355
Tsu02g02958 332 MobiDBLite consensus disorder prediction 119 136 - -
Tsu02g02958 332 CDD bZIP_plant_RF2 200 250 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02958 Tsu-Chr2 32574719 32578623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02958 1 276 bZIP Transcription Factor Family AT3G58120 53.265 2.59e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu02g02958 bZIP_1 2.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02958 - - lang:109363232 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02958 02 32574719 32578623 Tsu02g02958 02 32574719 32578623 ECH