Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02944 ATGCTTGGTGGAGGTTCTTTCTTTGGGGATCTTCAGTGGAGATTATCTTCTTTACCTATTAAGGTTGGGGGATTAAGTTTGTACTCTAAAGTAAAGGCCCCCTCATACACTTTTGTGGCTTCTAGATCCCAATCTCGGGTGTTACAAGATGATATATTGAGAGATAATGGGGATAACATCATTAGGAAAGTGGGGGATGGCCGTAATACTTTATTTTGGACGGAACCATGGCTGGAGGATTGTCCACTCGATCGGTCTTTTAGTCGTCTTTTTGATCTTGCGGAAAATAAATTCATCACGGTGGCGGATATGCACGGCTTAGGTTGGGGTGTTGATGGGGAGGCTTGGAAGTGGAGGAGGAGGTTGCGTGCGTGGGAGGAAGAGTTAGTTTTGGAGTGTGTGGAACGCCTTTCTAATGTTGTTTTGCAGGTTAATGNCTCTTGGCTTCACGCGGCTGCATCTGTATTGCGATGTAAGCATGGTCGGCTCCCATTTTTATATCTGGGTTTGGCCATTGGAGGAGATCCGAGAAAGTTACAATTTTGGTCTCCGTTGGTGAATAGAATCCGAGATCGTTTATCTGGTTGGAAATGTAAAAATCTGTCTATTGGTGGTCGGCTGATCCTTCTGAAATCTGTCTTATCTTCTATTCCGGTCTACttcctttctttcttcaaagctccctcagATGGGAGGGAGAGTGTGTTTCTCGGAGGGTGTGGGATCGAGTTGGTGGCGCACTTTGAATCATATTCGGGATGGGGTAGGATGGAAGATGTGGATCATTTATTCTTTCAATGTCCTGTGTATAGTCGGCTTTGGGCTTCGGTGTCCAAGTGGATGGGGGTGGAAACGGCTTTACACGGCACTTTGATCCTACATTCTAACCAGTTTTGTGGTCTCGGCGGTTCTTCGAAAAGTTATAATACCTTGTTAATCATCATATGGGTTGCGGTGCTATTTATCATTTGGAAGGACCGTAATCACCGTATTTTCAAAGCTGGTCAAGATTCTTTGGAGGCTATGGTGGAGAAGACGAATCATAGGTTTACCACAAGAATGCAGAGACGCATTTATGGTCAAGCTACTGATATTGCCATTCGACCTCTCAATGAAGAGAAAGCTGTTCAAGCTGCTGCTGATCTCCTTGGAGAACTCTTTGTTTTCACTGTTGCAGGAGCTGCTGTAATCTTTGAGGTGCAAAGAAGTTCTAGATCAGAGGCAAGAAAGGAAGAACTACGCAAACAGGAAATACAGGCAATAAAGACTAGGAGTGAAGAGTTGAGCAAGGAAGTTCAACTTCTTGTACAAAAGCTTGAAGAGGTGGAACAACTTGCTAGAAAGCGAGGACTTGCTGACATTCTTAATTTCAAGCACGCAAATGTGGGTTCCGTTTTCCATCAAATATCATTTCACCGGAACCTTCAACCCAATTCcacttctcttctttctccaATTCAACCCAATAAAGGTATGATGGAAGAAAATTCCAAGGGAAAATATggatcttcttcttctaaaaATTCCACGAAAGAGAAGGAGAAACATCTGGTGGATAAGATTCAAGGGATTTTCACCAATCTTCAATCTGCAAGAAAGGAAAGTAGGGCTAATGACATTGTGATCTGTGAGGAGCAGATGCATCAGTTGCTTCGAGAGTGGAAGGCCGAACTGGAGTCTCCGGCTACTTCCTTAGCTGATGGTAGCCTTGGTTCGTTTACTGGGGAACTAGCCCACCTGTTGCAAGAAATTGAGGAGAAAGATGATGCAACAAGTCCATTTACAAGCCCTGTGCCACTGAAGACTGGTCTCCATCAAAATAACATTAGTGATGGCAATTATCCATTTTTTCAGGAGAATTGTTTTGAGAATAACCAGCCACTAGATCATACTTTTAAAGGCTCTGCTTCATCTCTATTCAACAGTTCTTTAAATAACTCAGACATGGCACAGTTGGATTTTCATCCATTCGGTTTAAATCAAGATATGGATCAGAACGCTGTAGGTCACAACTCTGATTTGATTGGTCGGTTTAATTTGTTTGAGGACCATAGCCTCGGGCACAACacagaaataaaaaattcagaGTCAAGTCAATTTAGTTTTGAAGAAGGCATTGATTGTAATCAATTTTTCGTAGATAATGACACCACAAATTTTGGAGACATACCTAACATTCTTCCAAATATCTGCCCTCCACCTTCTGCTTTCCTATCTCCAAAATGTGCACTGTGGGACTGTTTCAGGCCTGCTCAAGGGTTAGAATGGTGCCAGGACTATTGTAGTACTTGTCATGAGCATTTGGCAAAAAATGAAGGTCCTGGCATGACTCCAATTTTGCGACCTGGTGGCATTGATATAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCAAAGGCAATGGGAAAAGAAGTGGGCATCCCTAAGTGTGAAGGCGCTGCTTCAACGAAAGCCCCCTGGAATGCTTCAGagtTCTTTGATATTTCTTTTCTTGAGGGTGAAACTGTTAGGGAATGGCTGTTCTTTGACAAGCCTAGAAGGGCGTTCGATAGTGGAACTAGGAAACAGAGATCACTCCCTGATTACCATGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACACGGGGGACAAAAGAGATCCTATTACATGGACCCCCAGCCTCCTAATCGTGATTGGCATTTGTACGAGTATGAGATCAATGGCCATGATGGTTGTGCATTATACAGATTAGAATTAAAGCTTGTAGATAAAAAGAAAAGTCCTAAGGGAAAAGTGTCTAAGGATTCTCTTAATGATTTGGAAAACAAGATGGGAAAGCTAACAGCTGCTTTTCCGTCGCCAGACAATGGAAAATCTGTCAAGGGAAAAACTGATGCCAAGTCTGAGAATGTTGACCTGCCTGCCTGA 2919 0.4203 MLGGGSFFGDLQWRLSSLPIKVGGLSLYSKVKAPSYTFVASRSQSRVLQDDILRDNGDNIIRKVGDGRNTLFWTEPWLEDCPLDRSFSRLFDLAENKFITVADMHGLGWGVDGEAWKWRRRLRAWEEELVLECVERLSNVVLQVNXSWLHAAASVLRCKHGRLPFLYLGLAIGGDPRKLQFWSPLVNRIRDRLSGWKCKNLSIGGRLILLKSVLSSIPVYFLSFFKAPSDGRESVFLGGCGIELVAHFESYSGWGRMEDVDHLFFQCPVYSRLWASVSKWMGVETALHGTLILHSNQFCGLGGSSKSYNTLLIIIWVAVLFIIWKDRNHRIFKAGQDSLEAMVEKTNHRFTTRMQRRIYGQATDIAIRPLNEEKAVQAAADLLGELFVFTVAGAAVIFEVQRSSRSEARKEELRKQEIQAIKTRSEELSKEVQLLVQKLEEVEQLARKRGLADILNFKHANVGSVFHQISFHRNLQPNSTSLLSPIQPNKGMMEENSKGKYGSSSSKNSTKEKEKHLVDKIQGIFTNLQSARKESRANDIVICEEQMHQLLREWKAELESPATSLADGSLGSFTGELAHLLQEIEEKDDATSPFTSPVPLKTGLHQNNISDGNYPFFQENCFENNQPLDHTFKGSASSLFNSSLNNSDMAQLDFHPFGLNQDMDQNAVGHNSDLIGRFNLFEDHSLGHNTEIKNSESSQFSFEEGIDCNQFFVDNDTTNFGDIPNILPNICPPPSAFLSPKCALWDCFRPAQGLEWCQDYCSTCHEHLAKNEGPGMTPILRPGGIDIKDGPLFAAVLAKAMGKEVGIPKCEGAASTKAPWNASEFFDISFLEGETVREWLFFDKPRRAFDSGTRKQRSLPDYHGRGWHESRKQVMKEHGGQKRSYYMDPQPPNRDWHLYEYEINGHDGCALYRLELKLVDKKKSPKGKVSKDSLNDLENKMGKLTAAFPSPDNGKSVKGKTDAKSENVDLPA 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02944 972 MobiDBLite consensus disorder prediction 480 513 - -
Tsu02g02944 972 MobiDBLite consensus disorder prediction 852 883 - -
Tsu02g02944 972 MobiDBLite consensus disorder prediction 924 938 - -
Tsu02g02944 972 Pfam Optic atrophy 3 protein (OPA3) 346 428 IPR010754 -
Tsu02g02944 972 Coils Coil 418 445 - -
Tsu02g02944 972 MobiDBLite consensus disorder prediction 852 889 - -
Tsu02g02944 972 PANTHER TRANSCRIPTION FACTOR VOZ2 493 967 - -
Tsu02g02944 972 PANTHER TRANSCRIPTION FACTOR VOZ1 493 967 IPR039277 GO:0006355|GO:0048578
Tsu02g02944 972 MobiDBLite consensus disorder prediction 924 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02944 Tsu-Chr2 32368012 32385832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02944 504 949 VOZ-9 Transcription Factor Family AT1G28520 51.549 1.63e-141 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Tsu02g02944 OPA3 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02944 - - mtr:MTR_4g079240 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02944 02 32368012 32385832 Tsu02g02944 02 32368012 32385832 ECH