Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02937 ATGGGATCCCATAGTAAAGACAATGTTGAAAAGCTGCTTCAAGCTCAAACCAAAGTATTCAATCACATTTTCAGTTTCATAAACTCAATGTCCCTTAAATGTGCAATTGAATTATCCATACCAGATATCATACAAAACTATGGTCAACCAACCCCACTCTCACAACTCATTGCTAAATTACCAATCCACCCTTCTAAAACCGGTGACATTTATCGTTTAATGAGAGTTTTAACACAATCCGGTTTCTTCATTGTCACTAAAAATGATGTAGAAGTAATGTATGAGCTTAATGATGCATCTAGATTATTACTTAAGGACCATCCTTATAGTATGACATCTATGTTACATGTTATACTTGGTCCAATTTTGAGTAAACCATGGTATCAACTTTCTAATTGGTACAAAAATGATGACCCTTCACCTTTTCACACCGAAAATAATGGTATTGCTTTATGGGATTTTGCTGGCCATGACCCTGATTTCAATCATTTGTTTAATGAAGCTATGGCTTGTGAAACTAGAATGGCTTCTAGTGTTATGATGGGAAAGTTTAAAGGTGTGTTTGAGGGATTGGAATCATTGGTTGATGTTGGTGGAGGTATAGGGACAATTACTAAGGTTATTGCTAAGTCATTCCCAAACATTGAATGCATTGTGTTTGATCTCCCACATGTTGTTGATGGCTTGCAAGGAAGTGAAAACTTGAAATATGTTGGAGGTGACATGTTTCAGGCTATTCCTCCTACTCAATCAATTTTACTCAAgGGTGTATTACATGACTGGAACGATGAGGAATGTTtggaaattttgaagaaatgcaaGGAAGCAATAAAGAGCAAAGGGAAAATGATAATCATCGATGCTGTGGTGGGGAATGAGAAGGAAGACACAGAATCATTTGAAGCAAAGATGTTCTATGATTTGGAGATGATGGTGTTGGTGAatggaaaagagagaaatgagaAAGAATGGTCTAAGTTGTTTTTCTCTGCTGGTTTTAATAACTACAAGATAACTCATGGTCTAGGTTTTAAATCTCTCATTGAAGTTTTTCCATAA 1059 0.3456 MGSHSKDNVEKLLQAQTKVFNHIFSFINSMSLKCAIELSIPDIIQNYGQPTPLSQLIAKLPIHPSKTGDIYRLMRVLTQSGFFIVTKNDVEVMYELNDASRLLLKDHPYSMTSMLHVILGPILSKPWYQLSNWYKNDDPSPFHTENNGIALWDFAGHDPDFNHLFNEAMACETRMASSVMMGKFKGVFEGLESLVDVGGGIGTITKVIAKSFPNIECIVFDLPHVVDGLQGSENLKYVGGDMFQAIPPTQSILLKGVLHDWNDEECLEILKKCKEAIKSKGKMIIIDAVVGNEKEDTESFEAKMFYDLEMMVLVNGKERNEKEWSKLFFSAGFNNYKITHGLGFKSLIEVFP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02937 352 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Tsu02g02937 352 Pfam O-methyltransferase domain 127 334 IPR001077 GO:0008171
Tsu02g02937 352 SUPERFAMILY "Winged helix" DNA-binding domain 10 108 IPR036390 -
Tsu02g02937 352 PANTHER ORCINOL O-METHYLTRANSFERASE 7 352 - -
Tsu02g02937 352 Gene3D - 2 103 IPR036388 -
Tsu02g02937 352 PANTHER O-METHYLTRANSFERASE 7 352 IPR016461 GO:0008168
Tsu02g02937 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 352 IPR016461 GO:0008168
Tsu02g02937 352 Gene3D Vaccinia Virus protein VP39 104 352 IPR029063 -
Tsu02g02937 352 PIRSF O-mtase 1 352 IPR016461 GO:0008168
Tsu02g02937 352 CDD AdoMet_MTases 194 290 - -
Tsu02g02937 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 108 350 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02937 Tsu-Chr2 32313179 32315187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02937 30 351 Monolignol Biosynthesis Gene Families AT5G54160 32.121 2.91e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02937 - K16040 gmx:100793263 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02937 02 32313179 32315187 Tsu02g02937 02 32313179 32315187 ECH