Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02934 ATGGGATCCCAAAGTGAAGACAATGTTGAAAAGCTGCTTCAAGCTCAAACCAAAGTATTCAATCACATTTTCAGTTTCATAAACTCAATGTCCCTTAAATGTGCAATTGAATTATCCATACCAGATATCATACAAAACTATGGTCAACCAATCCCACTCTCACAACTCATTGCTAAATTACCAATCCACCCTTCTAAAACCGGTGACATTTATGCTTTAATGAGAGTTTTAACACAGTCCGGTTTCCTCATTGTCACTAAAAATGATGTAGAAGACCACCCTTATAGTATGACATCTATGTTACATGTTATTCTTGGTCCAATTATGAGTAAACCATGGTTTCAACTTTCTAATTGGTACAAAAATGATGACCCTTCACCTTTTCACACCGAAAATAATGGAATTGCATTTTGGGATTATGCTAACCATGACCCTAatctaaataatttatttaatgaagCTATGGCTTGTGAAACAAGAATGGCTTCTAGTATTATTATGATGGAGAAGTTTAAAGGGGTGTTTGAGGGATTGAAATCATTGGTTGATGTTGGTGGAGGCATAGGGACAATGACTAAGGTTATTGCTAAGTCATTCCCAAACATTGAATGCATTGTGTTTGATCTTCCACATGTTGTTGATTGCAAGGAAGTGGAAACTTAA 663 0.3514 MGSQSEDNVEKLLQAQTKVFNHIFSFINSMSLKCAIELSIPDIIQNYGQPIPLSQLIAKLPIHPSKTGDIYALMRVLTQSGFLIVTKNDVEDHPYSMTSMLHVILGPIMSKPWFQLSNWYKNDDPSPFHTENNGIAFWDYANHDPNLNNLFNEAMACETRMASSIIMMEKFKGVFEGLKSLVDVGGGIGTMTKVIAKSFPNIECIVFDLPHVVDCKEVET 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02934 220 PANTHER ORCINOL O-METHYLTRANSFERASE 7 217 - -
Tsu02g02934 220 Gene3D Vaccinia Virus protein VP39 156 214 IPR029063 -
Tsu02g02934 220 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Tsu02g02934 220 Gene3D - 130 155 - -
Tsu02g02934 220 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 94 214 IPR029063 -
Tsu02g02934 220 Gene3D - 2 103 IPR036388 -
Tsu02g02934 220 Pfam O-methyltransferase domain 113 214 IPR001077 GO:0008171
Tsu02g02934 220 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 220 IPR016461 GO:0008168
Tsu02g02934 220 PANTHER O-METHYLTRANSFERASE 7 217 IPR016461 GO:0008168
Tsu02g02934 220 SUPERFAMILY "Winged helix" DNA-binding domain 10 98 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02934 Tsu-Chr2 32301293 32302281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02934 30 214 Monolignol Biosynthesis Gene Families AT5G54160 29.126 3.58e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02934 - K16040 gmx:100781008 267.7