Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02918 atgactCAATGTAGTGAGCTTCAAAACAATCATAGCATCACAATGGATGGAAGAAAGGATAGCTTAATTAGAACTTGTCTCACATGTGGTCATCATATCAAATGCCAAGAACAGGGTGGTGAAATTAATGATTTACCTGGATTGCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAGGTGAGGTCTGATATTCATAAGCTTCATCCTCTCATTGATGAGTTCATCCCTACTCTTGAAGGAGAGAATGGAATATGTTATACTCATCCACAGAAATTGCCAGGAGTAAGCAAAGATGGTCTGATCCGCCATTTCTTTCACCGGCCATCGAAGGCATACACAACCggaacaagaaaaagaagaaaggtacattcagatcaCGAGGATGGTAGTGAAACTCGTTGGCACAAAACAGGTAAAACAAGACCAGTCTACAACAATTCCAAGTTAAAAGGTTACAAAAAAATCCTTGTACTTTACACAAACTATGGAAAACAAAGAAAGCCAGAGAAAACAAATTGGGTGATGCATCAATATCATATTggaaatgatgaagaagagaaagaaggtGTGTTAGTTGTGTCCAAAGTTTTCTATCAAACTCAACCAAGACAATGTGGTGGTGGTAATTCATTGATGAAAGACTCAAAAACTATGAAGGGTCAAAGTGGAAATGAAGTAATGAATGGTAAAACTAATGGATCATTTGTTGAGTACTATCATTCAAATTTGATATCATTTGATCAAGGGAATCAAAATAGATCTAGCAATTTTGAAGGCGGTTCTTTCATTCCTTGA 822 0.3418 MTQCSELQNNHSITMDGRKDSLIRTCLTCGHHIKCQEQGGEINDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPQKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDHEDGSETRWHKTGKTRPVYNNSKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHIGNDEEEKEGVLVVSKVFYQTQPRQCGGGNSLMKDSKTMKGQSGNEVMNGKTNGSFVEYYHSNLISFDQGNQNRSSNFEGGSFIP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02918 273 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 266 IPR044799 GO:0003700
Tsu02g02918 273 MobiDBLite consensus disorder prediction 127 147 - -
Tsu02g02918 273 Pfam No apical meristem (NAM) protein 49 189 IPR003441 GO:0003677|GO:0006355
Tsu02g02918 273 ProSiteProfiles NAC domain profile. 48 208 IPR003441 GO:0003677|GO:0006355
Tsu02g02918 273 Gene3D NAC domain 57 212 IPR036093 GO:0003677|GO:0006355
Tsu02g02918 273 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 266 - -
Tsu02g02918 273 MobiDBLite consensus disorder prediction 122 151 - -
Tsu02g02918 273 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02918 Tsu-Chr2 32149352 32152251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02918 24 225 NAC Transcription Factor Family AT4G28500 76.733 4.07e-115 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu02g02918 NAM 2.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02918 - - gmx:100797459 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02918 02 32149352 32152251 Tsu02g02918 02 32149352 32152251 ECH