Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02917 ATGGAGGTTTGTTCAGAaggagaggagaagaagaacAAGGCACTAGAGGAAGAGAACAAGGTCAAGCGCAAAATGAAGTCTGCTTCACAGTTAGAGATTCTTGAAAAAACATATGCTGCTGAGTCTTACCCTTCTGAGGCAATGAGGGCTGAGTTATCTGTCGAGTTGGGTTTGTCTGATCGTCAGTTGCAGATGTGGTTCTGTCACCGGAGACAGAAGGATAGGAAGGCTGCACCGGTGGTAGTTAAGAAGGAGGTCGTGCTAACTTCGGTTCCATTTGTGGAGGGTGTTGAAAAAATACCAGTTGCTGATGTTAGGCATCATGATCATGGTTTGGCTTCTGTCTTGAGACCAATTGATAATGTGGACTCGCCGCGATTTGTGGCACAGCATGGGATGATGGCATTTCCTAGGATGATGGCATTGCCTGCAATGGATAGCAGTAGTTACAATGAACCCCATCGGACTATACAGGAGTTGCGAGCTGCTGCATTTGTGGAAAGACAGTTGGGGGAGCCATTGAGAGAGGATGGACCCATTCTTGGGGTGGAATTTGATTCTCCGCCTCTGGGTGCATTTGGGGCACCATTAGGGTCAGTGGCAATTGGGCAAAACAGGCAATCTGAATGGCCTGTTGAGGCAAAAGTTTATGAACATTTGGATAAGGGAATTTCAAGGACTCTCCATGAATATCAATTCATTCCAGAGCAGCCAACTGTTAGAAATGAGATATATGAGAGAGTTACTACATCTATCCACTTTAGTTCTCTTGATGGTGTTCTACGTTCTAGGACATCACTATCTAGTGGTCCATCTTTCCTTAATGGGAATGAATCTGAACCTAAGGTGTATGGAGTTCAAGGTCAGAAGATACCTGGTCTAAATCTTTTGTCTCAGTCTGAGCAAGGTAGGCCAAATCATGTTATGCTTTCTGCTTCAGGAGGGAATGATGATGTTCCACAAAAAAACCCATTTGTTGATGTAACTCTTGACATTCAAAGGGGGGATCACCAAGTAACTCTGATTGATGGCCCTCTAGTGCCATCTGATAGGAGGGTTATCCATGAGGAGGAACTTTCAAGGTTTCAAAGGAAGCGAAAGAATGAAGAGGCTAGAATGCAACGGGAACTTGAAGTGCAAGAgaaaagaattagaaaagaGCTTGTAAAACAGGATATTCTAAGGCAAAAGAGAGAGGAGCAAATAAAGAAAGAGATGGAGAGGCAAGAACGTGAAAGGCAGAAGGAAGAGGAAAGGTTATTGCGTGAAAGACTGCGAGAGGAGGAGAGGCTCCTTAGAGAACAGAGACGTGAGCAGGAGCGGCGGGAGAAGTTTTTGCAGAAGGAATCAATCAGAACTGAGAAACTGAGACAGAAGGAAGAACTACACAGGGTGAAAGAGGAGGCAAGGATTAAAGCTGCCAGTGAGAGAGCTATTGCCCGCAGAATGGTTAAAGACGCAATGGACCTTATTGAAGATGAACGTCTGGAGCTCATGGAATTAGCTGCATCAAAGAAGGGGCTATCTTCAATACTGGCTCTTGACTATGAAACTATGCAAAATCTTGAATCATATGGAGATGGGCAGACTTCCTTCCCACCCAAGTCTGTACAGTTGAAAAGAGCTTTTTCAATTCAACCTTGGTCAGATTCTGACGAGAATGTAGGAAATCTTTTAATGGTTTGGAGGTTCTTGATTACCTTTGCTGATGTTCTTGGAATATGGCCATTTACCTTGGATGAGCTTATACAAGCTTTTCATGACTATGACCCTAGGATGTTAGGTGAGGTCCATATTGCTCTTCTGAGATCCATTATAAACGATATTGAAGATGTTGCAAGAACACCCACTACTGGATTAGGAGCTAACCAAAACAGTGTTATGAACTCTGGTGGGGGACATCCACAGGTAGTTGAAGGGGCGTATGTATGGGGTTTTGATATAAGAAATTGGCAGCGGCATTTAAATCCATTAACATGGCCGGAGATTTTGCGACAATTTGCATTGTCAGCTGGATTTGGGCCGCAGTTGAAGAAACAGAATATTGAGCAGGTACATCCTAGCAACAATGAGGGTAATGATGGTAAAGATATAATTTCTAATCTACGCAGTGGAGCTGCTGTTGAAAATGCTGTTGCTATTATGCAAGAAAAGGGATTATCTAATCCTAGAAGACATAGGCATCGTTTGACGCCTGGAACTGTTAAATATGCTGCATTTCATGTCCTGTCTCTTGAAGGAAGCAGAGGCCTCAATATATTGGAAGTTGCAGACAAGATTCAGAAATCTGGACTTCGTGATCTTACAATAAGCAAAAATCCAGAGGCTTCTATAGCTTCTGCTTTGTCTAGGGATACAGAACTATTTGAAAAGACAGCTCCTTCAACATATTGTGTACGTCCTGCATATAGAAAGGACCCAGCTGATTCTGAAGCAATTTATTCATCTGCCAGGGAAAGAATCAGGATATTCAAAAGTGGTTTTGTGGGTGCAGAAGAAGCTAATGATGGTGAAAGGGATGAAGATTGTGAAAACGATATGGCAAAAGATCCCGAGATTGATGATTTTGGAGCTCAACCAAATACGGAAAAGGAGGTTTTAAATTTTGAGGAATTTAATGCAAACACTGTCGTGAGAAGTGGGAAGGACAATGGTGAGGTTTTGCAAACTCCTGAAAGTTGCCATGAGAAAGTGGATGAGGGTTTAAGATCAACTGTTGATGAAGGTTTCAACGAACATAAAGATGTCTGTATATCTAGTAAAGTTACTGTTTGCAGTAATGACGTTGCTAGTCCAATTCTAAAAGGCTTGGATGTTGATGAAAACACTCCTGGTGAATCATGGGTACAAGGGCTTATGGAGGGAGAGTACTCGGATCTTAGTGTAGAGGAGCGTCTTCACGCTCTTGTTGCTTTGATTACTGTGGCAATTGAAGGAAATTCTATCCGTATTGTGCTGGAGGAACGTCTAGAAGCTGCAAATGCTTTAAAGAAACAGATAGGGGCAGAGGCACAGCTTGATAAACGCCGTATTAAAGAggattattttgttaaaatgcAGTCTTCGTCATATTTGAAAAACATGAACGAACCAGCTGTTACATTTCCATCAGTAGGGGGTAAACAGTGCCCATTGCATACTGTTGATGTCGAAAATGATAAGGCTTTACTCACTCCCTGTGAGCGGCATGGACAGATAAATGCACTACAGGAAAGTAAAAATCTTCTGCAGAGTTCCTTAGAAGTGAACATGCAGAGGCAAGATTGTTCTACTGGCCCGGATAATTATTCAATCCAACAATCTATATATGCTTCTGAAAAATCAAggtcaaatttaaaatcatacATTGATCACTTGGCTGAACAAACTTACATTTGTAGATCATTGCCTCTTGGTTTGGATCGAAGAAGAAACCGATACTGGCAATTCACTACGTCTGCTTCTCAAAATGATCCAGGTTGTGGTAGGATTTTTGTGGAATTGCGTGACGGCTGTTGGAAGCTGATTGATTCTGAAGAGGGTTTTGATGCTCTATTGGTATCATTGGACATACGTGGGATCAGGGAATCCCACTTGCATATGATGTTGCAAAGAATTGAAATGTCCTTCAAAGAATGTGTTAGAAGGAATGTCCAAAATGGAGACACTGTCAAGAAACTCCAGACAGAAGCAGTTAAAATAGCTACAGAGCAAGATTGCAGTGCTAATATTTACTATCCTACTTCTGCATGTATTGATGATTTGGACACATCAGTGGCGTCAACATCTTTTACAGTTCAGCTTGGAAGAAATGAAGTTGAGAACAAAGATGCTTATATGAGATATTGGGACTTTGAGAAATGGATGCGAAAAGAATGTCTAAATTGTTCAGTATCGCGTGCAATGAAGTTTGGGAAGAAGAGGTGCAACCAACTACTTCTGATGTGTGATTTGTGCCATCGTGTCTATTTCTTTAGAGGATCACCGTGTCCTTCATGCCATAGAACTGTCAGTACTAGTCAGGGGAACTCTAGTTCTTATGTCAAAATGAATATTGACACTCAATTGTCTCATGATTCATCCTCTTCTCCAATGAGGACGAGATTGCTCAAAATCCTCTTGTCAGTTGTTGAGGCAACCCTTCCTCAAGAAGCTCTGCAACCTTTTTGGACAGAGAGGTACAGAAAGTCTTGGAGTTCAAAGCTGGAAACTTCCTCGTCAACTGAAGACATTCTTCAGATGTTGACTGCATTGGAAGGTGCTATAAAAAGGGAGTATTTGGCTTCAGACTATGAAACTACCAGTGAGCTGTTAGGTTCAGTTTGCTCATTCGGATGTCTCCCTAATGATACCATTGGTGATGGAACGATACCTGTACTTCCATGGGTGCCATATACAACTGCTGCTGTGGCTCTGAGGCTCATGGAACTTGATGCATGTGTCTGTTACACCTCACAGCAGAAGCTGGAGTCCAAGAAGGATAAAAAAGTTGGAATTGTTGTGAAGCTTCCATCAAAATATGCTGCTGCCAAAAATTCCTACGATGCTGGTGCAATTGTAACTTCATTTCAGGCTAAGCATACTGTAGAGCACCGGGGTGCTATTGGTGGTGCTCTAGGTGCTGCCCTTGAGAGCTGCAGCAGACGACAAAGGACTCGACAAGGCCGCAGCCATTCTCGTGATCAAAGATCACAGGGTAGAGTTGCTAGTTCCAGATCGACTTCAAGAAAGAGAAGCACTATGTCTAACAGTATGAAAAAAGATAGTAGGATAAAAGGAAAATTACTTGGATGGAAAGGGACGCCGAACGTTCGTGGTCGGAGGAGCGTTAGAAGCAGGCAGAAACCTGCAGCCAAGATGGATGTGATCATCAGTGAGAGGGATACCCCAAAAGATATCATAGAGGAGATTAATGAAGATGAAACAGAAGCCAGTGCACAAAATGCTACCAATTTGGAAAGATCAGACTATGAAGGTGATCTTTATCGAGCAACAGACAAGTGTGATTATTTGGTagataataataacaatggaTATAAGGATGGATTTAGTGGGAAATCTGAGAACTTAATAGAACAAAGGCACTATAATGTGGATGATGAGAACGATGTGAATATGGATGACGATAACAGTGAGGAAGATGGGGAAGTCGATCTTAATACTGAAGATTGTATAATTGGAGGGGACTCGGATACAGGGTACAAcagagaagaaaatgaagaacatGAGGATCCAGATGGAGATGGTTCTACATCATCAGATTGTAGTGATTAA 5253 0.4148 MEVCSEGEEKKNKALEEENKVKRKMKSASQLEILEKTYAAESYPSEAMRAELSVELGLSDRQLQMWFCHRRQKDRKAAPVVVKKEVVLTSVPFVEGVEKIPVADVRHHDHGLASVLRPIDNVDSPRFVAQHGMMAFPRMMALPAMDSSSYNEPHRTIQELRAAAFVERQLGEPLREDGPILGVEFDSPPLGAFGAPLGSVAIGQNRQSEWPVEAKVYEHLDKGISRTLHEYQFIPEQPTVRNEIYERVTTSIHFSSLDGVLRSRTSLSSGPSFLNGNESEPKVYGVQGQKIPGLNLLSQSEQGRPNHVMLSASGGNDDVPQKNPFVDVTLDIQRGDHQVTLIDGPLVPSDRRVIHEEELSRFQRKRKNEEARMQRELEVQEKRIRKELVKQDILRQKREEQIKKEMERQERERQKEEERLLRERLREEERLLREQRREQERREKFLQKESIRTEKLRQKEELHRVKEEARIKAASERAIARRMVKDAMDLIEDERLELMELAASKKGLSSILALDYETMQNLESYGDGQTSFPPKSVQLKRAFSIQPWSDSDENVGNLLMVWRFLITFADVLGIWPFTLDELIQAFHDYDPRMLGEVHIALLRSIINDIEDVARTPTTGLGANQNSVMNSGGGHPQVVEGAYVWGFDIRNWQRHLNPLTWPEILRQFALSAGFGPQLKKQNIEQVHPSNNEGNDGKDIISNLRSGAAVENAVAIMQEKGLSNPRRHRHRLTPGTVKYAAFHVLSLEGSRGLNILEVADKIQKSGLRDLTISKNPEASIASALSRDTELFEKTAPSTYCVRPAYRKDPADSEAIYSSARERIRIFKSGFVGAEEANDGERDEDCENDMAKDPEIDDFGAQPNTEKEVLNFEEFNANTVVRSGKDNGEVLQTPESCHEKVDEGLRSTVDEGFNEHKDVCISSKVTVCSNDVASPILKGLDVDENTPGESWVQGLMEGEYSDLSVEERLHALVALITVAIEGNSIRIVLEERLEAANALKKQIGAEAQLDKRRIKEDYFVKMQSSSYLKNMNEPAVTFPSVGGKQCPLHTVDVENDKALLTPCERHGQINALQESKNLLQSSLEVNMQRQDCSTGPDNYSIQQSIYASEKSRSNLKSYIDHLAEQTYICRSLPLGLDRRRNRYWQFTTSASQNDPGCGRIFVELRDGCWKLIDSEEGFDALLVSLDIRGIRESHLHMMLQRIEMSFKECVRRNVQNGDTVKKLQTEAVKIATEQDCSANIYYPTSACIDDLDTSVASTSFTVQLGRNEVENKDAYMRYWDFEKWMRKECLNCSVSRAMKFGKKRCNQLLLMCDLCHRVYFFRGSPCPSCHRTVSTSQGNSSSYVKMNIDTQLSHDSSSSPMRTRLLKILLSVVEATLPQEALQPFWTERYRKSWSSKLETSSSTEDILQMLTALEGAIKREYLASDYETTSELLGSVCSFGCLPNDTIGDGTIPVLPWVPYTTAAVALRLMELDACVCYTSQQKLESKKDKKVGIVVKLPSKYAAAKNSYDAGAIVTSFQAKHTVEHRGAIGGALGAALESCSRRQRTRQGRSHSRDQRSQGRVASSRSTSRKRSTMSNSMKKDSRIKGKLLGWKGTPNVRGRRSVRSRQKPAAKMDVIISERDTPKDIIEEINEDETEASAQNATNLERSDYEGDLYRATDKCDYLVDNNNNGYKDGFSGKSENLIEQRHYNVDDENDVNMDDDNSEEDGEVDLNTEDCIIGGDSDTGYNREENEEHEDPDGDGSTSSDCSD 1750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02917 1750 MobiDBLite consensus disorder prediction 1539 1611 - -
Tsu02g02917 1750 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1750 IPR044977 GO:0006357
Tsu02g02917 1750 Pfam HB1, ASXL, restriction endonuclease HTH domain 733 800 IPR007759 GO:0006355
Tsu02g02917 1750 Coils Coil 5 25 - -
Tsu02g02917 1750 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 945 987 IPR028942 -
Tsu02g02917 1750 Gene3D - 14 79 - -
Tsu02g02917 1750 ProSiteProfiles 'Homeobox' domain profile. 17 77 IPR001356 GO:0003677
Tsu02g02917 1750 Pfam Homeodomain 22 76 IPR001356 GO:0003677
Tsu02g02917 1750 SMART testlast3 552 611 IPR018501 -
Tsu02g02917 1750 CDD homeodomain 20 76 IPR001356 GO:0003677
Tsu02g02917 1750 SUPERFAMILY Homeodomain-like 18 76 IPR009057 -
Tsu02g02917 1750 Coils Coil 352 379 - -
Tsu02g02917 1750 Coils Coil 395 468 - -
Tsu02g02917 1750 MobiDBLite consensus disorder prediction 1687 1750 - -
Tsu02g02917 1750 MobiDBLite consensus disorder prediction 1559 1573 - -
Tsu02g02917 1750 ProSiteProfiles DDT domain profile. 552 611 IPR018501 -
Tsu02g02917 1750 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1750 - -
Tsu02g02917 1750 SMART HOX_1 19 81 IPR001356 GO:0003677
Tsu02g02917 1750 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1127 1199 IPR028941 -
Tsu02g02917 1750 MobiDBLite consensus disorder prediction 1695 1713 - -
Tsu02g02917 1750 Pfam DDT domain 553 608 IPR018501 -
Tsu02g02917 1750 ProSiteProfiles HARE-type HTH domain profile. 733 802 IPR007759 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02917 Tsu-Chr2 32107965 32123537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02917 18 1489 Homeobox Transcription Factor Family AT5G44180 49.767 0.0 1279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Tsu02g02917 WSD 6.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02917 - - gmx:100797480 2125.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02917 02 32107965 32123537 Tsu02g02917 02 32107965 32123537 ECH