Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02915 atgGGTGTAGATTACTACAAAATCTTGCAGGTTGATAAGAATGCcaatgatgatgaattgaagaaGGCTTATAGGAAACTTGCCATGAAATGGCACCCTGATAAAAATCCAACCAACAAAAAAGAAGCAGAAGCTAAGTTCAAGCAAATTTCTGAAGCCTACGATGTACTTAGTGATCCTGAAAAGAGAGCTATCTATGATCAATATGGGGAAGAGGGTTTAAAGGGTCAAGTTCCTCCTCCTGATGCTGGTAGTAGTAGTGGAACTAGTTTCTATTCAACAGGAGATATCCCTGGATCGTTTCGGTTCAATCCGAGGAATGCAGATGACATTTTTGCAGAGTTTTTTGGATTCTCAAGTCCATTCGGTGGCATGGGTGGAAGAGGTGGCAGTGGCGGAGGCGGCATGAGATCTAGGTTCCCTGGTGGAATGTTTAGTGATGATATGTTTGGATCTTTTGGGGAAGGAGGAGGAATACATGTGAATCAAGGTGCACCTCGTAAAGCTCCTGCTATTGAAAACAAGTTGAGTTGCACTCTTGAGGAGATATATAGAGGAACtacaaagaagatgaagatctcTAGAGAAATAGCTGATGCTAGTGGCAAAACCATGCCAGTGGAAGAGATATTGACCATAACGGTTAAGCCTGGTTGGAAGAAGGGGACAAAGATCACCTTCCCCGAGAAGGGCAATGAACAGCCAAATGTAACCGCCGCAGATCTTGTTTTTGTAATCGATGAAAGGCCACACAGCGTCTTCAGTCGCGAAGGAAACGATCTGATTGTGACTCAAAAGATATCTCTTGCAGAGGCCTTAACAGGTTATACAGTGCACCTCACTACACTAGATGGTAGAAACTTAAGCATACCAATCAACAATATCATTCATCCTAACTATGAGGAGGTTGTTCCAAAAGAAGGAATGCCAGTCCCCAAGGATCCATCAAAGAAAGGGAATTTGAGGATAAAGTTTAACATTAAGTTCCCAACTCGGCTCACTGATGAACAAAAAGCAGGAATTAGGAAACTCTTGGCTGCTTCAGGCTGA 1050 0.4143 MGVDYYKILQVDKNANDDELKKAYRKLAMKWHPDKNPTNKKEAEAKFKQISEAYDVLSDPEKRAIYDQYGEEGLKGQVPPPDAGSSSGTSFYSTGDIPGSFRFNPRNADDIFAEFFGFSSPFGGMGGRGGSGGGGMRSRFPGGMFSDDMFGSFGEGGGIHVNQGAPRKAPAIENKLSCTLEEIYRGTTKKMKISREIADASGKTMPVEEILTITVKPGWKKGTKITFPEKGNEQPNVTAADLVFVIDERPHSVFSREGNDLIVTQKISLAEALTGYTVHLTTLDGRNLSIPINNIIHPNYEEVVPKEGMPVPKDPSKKGNLRIKFNIKFPTRLTDEQKAGIRKLLAASG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02915 349 Gene3D - 251 331 - -
Tsu02g02915 349 SUPERFAMILY HSP40/DnaJ peptide-binding domain 253 339 IPR008971 GO:0006457|GO:0051082
Tsu02g02915 349 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 346 - -
Tsu02g02915 349 CDD DnaJ 4 59 IPR001623 -
Tsu02g02915 349 Pfam DnaJ C terminal domain 172 330 IPR002939 -
Tsu02g02915 349 SUPERFAMILY HSP40/DnaJ peptide-binding domain 166 262 IPR008971 GO:0006457|GO:0051082
Tsu02g02915 349 Pfam DnaJ domain 4 67 IPR001623 -
Tsu02g02915 349 MobiDBLite consensus disorder prediction 72 91 - -
Tsu02g02915 349 Gene3D - 170 249 - -
Tsu02g02915 349 PRINTS DnaJ domain signature 6 24 IPR001623 -
Tsu02g02915 349 PRINTS DnaJ domain signature 24 39 IPR001623 -
Tsu02g02915 349 PRINTS DnaJ domain signature 42 62 IPR001623 -
Tsu02g02915 349 PRINTS DnaJ domain signature 62 81 IPR001623 -
Tsu02g02915 349 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Tsu02g02915 349 SUPERFAMILY Chaperone J-domain 3 129 IPR036869 -
Tsu02g02915 349 SMART dnaj_3 3 62 IPR001623 -
Tsu02g02915 349 Gene3D DnaJ domain 3 156 IPR036869 -
Tsu02g02915 349 CDD DnaJ_C 172 333 - -
Tsu02g02915 349 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 346 - -
Tsu02g02915 349 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02915 Tsu-Chr2 32101277 32103578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02915 5 69 C2H2 Transcription Factor Family AT1G74250 40.580 1.53e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02915 K09510 - gmx:100797487 588.571