Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02896 ATGGCCACCGCGCTCCACAACTCCCCCGCTTTCATCGACGATCCTCTCTTGCCCTTTCTCCGATCAATCAAAAAAGCCCTAGAAGATTCCACTCACAATCTCACCAAATTACTCTCAGATTGCATCAACAAATTCAAGGACAATCACCGCTACCGAAATGATCCCAGATTTCTCAAGATCTGGTTCCTATATATGGATGTTAGTGCTGATTTTGACAGTGTTTTCAAAAGAATGCTGGATAGTAATGTATGTACCAACGATGCTTCACTTTATGTGTATTCTGCATGTTTTTTTGAAGCAAAGGGTAGATTGCGCGATGCTCACACCATCTATAAGCTCGGCATTTCCAAAAATGCAGAGCCAATTAAGTGGTTGGAAAAGGCATATACCTTATTTCTCAGTAGAATATCTGAAATATGTAATGCTGCTTCAAGCCAGAAGGCTGATTATAAAGAATCTACTACATTGGAAAATGATGGCATTAATCCATGGGACACCTCTACTCTGAATGACCTTTTGAAGAAGATAAATCCTTTAATTGCGAAATTTGACGGGTATCGTTCGAGCACTAAATCTTATACAGGAAAAGTGGCCTTATCCACTTTGAAGAATGCATCAAGGAATAAAGTTATAGATATAGGTGGAATGAAGTACCTTATCAAGGGTTGTGCTGGACAGGGTGGTTTTGCTCAAGTATACAAGGCAAATGTCAACAGTGACCCTGATGATGTTGTGGCACTAAAGATACAAAAGCCAGCTTTCCCTTGGGAATTTTACATGTATCGTCAGCTTGATCAGCGCATCTCTGGCAGAGAAAGGTCAAGCTATGGTTTCGCTCATAAAATTCATCTCTATTCTGACTATAGCATACTCATTTGTGACTATTTAGCTAATGGGACACTACAGGATGTCATCAACTCATATTTGGTCATAGGAAAATCCATGGAAGAAGTATTGTGCATTTATTACACAACAGAAATGTTGCACATGATTGAAACTTTGCATGATGTTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTGTACGTTATTCTAGGGGTAACCTCACAGAAGAAGGATTCTTAGACCGAAGCGGTTCTTGGGGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATTGATCTTCATCTCTTTCCAGATCACACAATATTTAAGGGAGATTGTAGAACTTCTGGTTTTCGATGCATTGAGATGCAAGAGGATAAGCCGTGGAAATTTCAGGTAGATGCGTATGGCCTTTGCGGTGTTGTCCATACGATGCTGCATAATTGCTATATGGAAATCGTTAAGAAAGAATCATCTAATGGGAGCTCTGTGTACCTTCCCAAACTACCCTTTAAACGTTACTGGAACGCCGATCTCTGGAAGACTTTCTTCACTAAGATGCTAAATAACTACCCCTGCCATGATGATAGGAAGTTGCTGCAGGAATTGAAGAAGTCCTTCCAGGACTATATGGTCTCCGATCCTCAACTTATAAAGAAACTCAAGGAGTTACTAGCGAAGCAAAGGGTTTCTCTATGTTCTGCTTACTAA 1569 0.4066 MATALHNSPAFIDDPLLPFLRSIKKALEDSTHNLTKLLSDCINKFKDNHRYRNDPRFLKIWFLYMDVSADFDSVFKRMLDSNVCTNDASLYVYSACFFEAKGRLRDAHTIYKLGISKNAEPIKWLEKAYTLFLSRISEICNAASSQKADYKESTTLENDGINPWDTSTLNDLLKKINPLIAKFDGYRSSTKSYTGKVALSTLKNASRNKVIDIGGMKYLIKGCAGQGGFAQVYKANVNSDPDDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSYGFAHKIHLYSDYSILICDYLANGTLQDVINSYLVIGKSMEEVLCIYYTTEMLHMIETLHDVGLIHGDFKPDNLLVRYSRGNLTEEGFLDRSGSWGDQGLCLVDWGRGIDLHLFPDHTIFKGDCRTSGFRCIEMQEDKPWKFQVDAYGLCGVVHTMLHNCYMEIVKKESSNGSSVYLPKLPFKRYWNADLWKTFFTKMLNNYPCHDDRKLLQELKKSFQDYMVSDPQLIKKLKELLAKQRVSLCSAY 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02896 522 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 143 520 IPR015661 GO:0007094
Tsu02g02896 522 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 13 137 IPR015661 GO:0007094
Tsu02g02896 522 PANTHER BUB1 KINASE, ISOFORM A-RELATED 143 520 - -
Tsu02g02896 522 PANTHER BUB1 KINASE, ISOFORM A-RELATED 13 137 - -
Tsu02g02896 522 SMART mad3_bub1_i 1 115 IPR013212 -
Tsu02g02896 522 Pfam Protein kinase domain 225 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02896 522 Pfam Mad3/BUB1 homology region 1 12 115 IPR013212 -
Tsu02g02896 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Tsu02g02896 522 Gene3D Transferase(Phosphotransferase) domain 1 216 519 - -
Tsu02g02896 522 SMART serkin_6 218 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02896 522 ProSiteProfiles BUB1 N-terminal domain profile. 1 156 IPR013212 -
Tsu02g02896 522 SUPERFAMILY Protein kinase-like (PK-like) 217 495 IPR011009 -
Tsu02g02896 522 ProSiteProfiles Protein kinase domain profile. 218 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02896 522 Gene3D - 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02896 Tsu-Chr2 31839218 31845189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02896 217 437 CBL-interacting serine-threonine protein kinases AT2G26980 25.221 5.24e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Tsu02g02896 Pkinase 2.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02896 K02178 - gmx:100802272 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02896 02 31839218 31845189 Tsu02g02896 02 31839218 31845189 ECH