Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02881 atggATCAAGTAAGAGGAAGTGATAAACCTTCTAGCTCTACACCCAAAGTTGAAAGAAGACTGGTCgagaaaaatagaagaaatcAAATGAAGATTCTTTACTCCAAACTCAATTCTCTTCTCCCTAACTATAATCCCAAGGAATTCGCGTTACCATTACCGGACCAAGTAGATGAGGCGATAAACTACATAAAGAGTTTAGAGGCAAATGTGAAGATGGCTAAGGAGAAGAAAGAGAGGTTATTAGAGGGAAAGAAGAAAAGATCGCGCAAATATTGTTCGAATCTACCAAAATTGCTACATTTTGAAATTCATGAAATTGGTTCTTCTCTACAAATCGTTCTCACATGTGGGTTAGATAACCAGTTCATTTTCTATGAAATCATTCGCGTATTGCATGAAGAGAATATAGACGTAAGAAGTGTCAATTCCTCGAATGTCGGAGATAATTCACTCCTTCATGTCGTGCATGCTGAgATTCCTCAATCTTGTGTTCAATTTGGAGCTTCAAAAGTGAGTGAGAGATTGAAAAGGTTTGTGAATGGATCCTCCAGTGACGTGGAAATGCAGTCTGATGAGTTGTGGGATTTTGAAATTGGAACTGATTTGTGGGGGTTTAATTTCTAG 627 0.3668 MDQVRGSDKPSSSTPKVERRLVEKNRRNQMKILYSKLNSLLPNYNPKEFALPLPDQVDEAINYIKSLEANVKMAKEKKERLLEGKKKRSRKYCSNLPKLLHFEIHEIGSSLQIVLTCGLDNQFIFYEIIRVLHEENIDVRSVNSSNVGDNSLLHVVHAEIPQSCVQFGASKVSERLKRFVNGSSSDVEMQSDELWDFEIGTDLWGFNF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02881 208 Gene3D - 5 97 IPR036638 GO:0046983
Tsu02g02881 208 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 14 67 IPR011598 GO:0046983
Tsu02g02881 208 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 187 IPR015660 GO:0003700|GO:0006357
Tsu02g02881 208 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 11 187 - -
Tsu02g02881 208 MobiDBLite consensus disorder prediction 1 22 - -
Tsu02g02881 208 Coils Coil 57 84 - -
Tsu02g02881 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 83 IPR036638 GO:0046983
Tsu02g02881 208 Pfam Helix-loop-helix DNA-binding domain 17 68 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02881 Tsu-Chr2 31565324 31566413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02881 17 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 38.674 4.87e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tsu02g02881 HLH 5.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02881 - - gmx:100817883 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02881 02 31565324 31566413 Tsu02g02881 02 31565324 31566413 ECH