Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02869 ATGGCTTATATGTGTGCAGACAGTGGAAACTTAATGGCAATTGCTCAACAAGTCATCaaccaaaaacaacaacaacaagaacagcaagaacaacaacaacaacatcatcatcatcatcatcatcaaaatctctTAGGTTTAACGAACCCTCTTTCTCTGCATCCATGGAACAACAACATTCCAGTTTCATCACTACCACCTTTATCTTTCCCAACCACCGATTTCGCCGACCCATTTCAAGTCGGGCCGAGTCAAGAAACTCCCGATCCCACTTTCCATTTCCCTCCACCACTCGACCCTCACTCCACCACTTTCCGTTTCTCCGATTTCGATTCCGACGACTGGATGGACACTTTAATGGCCGCCGCCGACACCCAAACCCACGATTTTCAGCTTAACCCGTTTTCCTCTTGCCCGACCCGACTCTCTCCACAATCGGATCTTCTCTTACCCGCCACCGTTCCGCTTCAAATCCCAACCCAACAACCATCACCCACTCCGCAACGCAAAAACCACACCACTGCCGAAACGACGTCGTCTACTACAAACCCTCTTCTAAAATCCCTAATCGAAATCGCTTCTCTTATcgaaaccgaaccaaatcaAGCCATTGAAACCCTAACTCATCTCAACAAATCAATTTCACAAAACGGAAACCCTAATCAAAGAGTTTCATTCTACTTCTCACAAGCTTTAACCAACAAAATCACTTCACAATCACAAATTTCTTcgttttcttcttcaacaacaactaCATGGGAAGAATTAACGCTCTCTTACAAAGCCCTAAACGATGCATGCCCTTATTCAAAGTTCGCACATTTAACCGCAAATCAAGCAATTCTCGAAGCAACGGAAGGCGCAACGAACATTCACATAGTTGATTTTGGAATTGTTCAAGGGATTCAATGGGCTGCATTATTACAAGCATTTGCAACTCGTTCTTCTGGTAAACCTAATAGTGTAAGAATTTCTGGTATACCTGCTATGGCTTTAGGAACTTCACCtgtttcttcaatttcagctACTGGTAATCGTTTATCTGAATTTGCAAAACTTTTAGAGTTGAATTTTGAGTTTACGCCGATTCTTACACCGATTCAGTTGCTTAATGAGTCTAGCTTTTGTATTCAACCAAATGAGGCTTTAGCTGTTAATTTCATGCTTCAATTGTATAATCTTTTGGATGAGACTATGGATGCTGTTGAAACAGCGCTCCGCTTGGCTAAATCTTTGAACCctaaaattgttactcttggTGAATATGAAGCTAGCTTGACGACTCGGGTTGGTTTTGTTGATCGgattaaaactgcttttaattattttgctGCTTTTTTTGAGAGTTTGGAGCCGAACATGGCGTTGGATTCGCCTGAGAGGTTTCAGGTGGAGAGTCTTTTGCTTGGTAGGAGAATTGATGGTGTGATTGGTGTGAGGGAGAGGATGGAGGATAAAGAACAGTGGAAGGTTTTGATGGAAAAATGTGGTTTTGAATCTGTTAGTTTGAGTCATTATGCAATTAGTCAAGCTAAGATATTGTTGTGGAATTATAGTTATAGTTCTTTGTATTCTCTTGTTGAATCTCAACCTGGGTTTTTGTCTTTGGCTTGGAAAGATGTTCCTCTATTGACTGTTTCTTCTTGGCGTTGA 1653 0.3775 MAYMCADSGNLMAIAQQVINQKQQQQEQQEQQQQHHHHHHHQNLLGLTNPLSLHPWNNNIPVSSLPPLSFPTTDFADPFQVGPSQETPDPTFHFPPPLDPHSTTFRFSDFDSDDWMDTLMAAADTQTHDFQLNPFSSCPTRLSPQSDLLLPATVPLQIPTQQPSPTPQRKNHTTAETTSSTTNPLLKSLIEIASLIETEPNQAIETLTHLNKSISQNGNPNQRVSFYFSQALTNKITSQSQISSFSSSTTTTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGATNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLELNFEFTPILTPIQLLNESSFCIQPNEALAVNFMLQLYNLLDETMDAVETALRLAKSLNPKIVTLGEYEASLTTRVGFVDRIKTAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVRERMEDKEQWKVLMEKCGFESVSLSHYAISQAKILLWNYSYSSLYSLVESQPGFLSLAWKDVPLLTVSSWR 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02869 550 MobiDBLite consensus disorder prediction 71 100 - -
Tsu02g02869 550 Pfam GRAS domain family 186 550 IPR005202 -
Tsu02g02869 550 Coils Coil 12 35 - -
Tsu02g02869 550 MobiDBLite consensus disorder prediction 19 43 - -
Tsu02g02869 550 MobiDBLite consensus disorder prediction 157 181 - -
Tsu02g02869 550 ProSiteProfiles GRAS family profile. 176 550 IPR005202 -
Tsu02g02869 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 186 549 IPR005202 -
Tsu02g02869 550 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 186 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02869 Tsu-Chr2 31342651 31345081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02869 1 550 GRAS Transcription Factor Family AT5G66770 54.333 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu02g02869 GRAS 1.8e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02869 - - adu:107477343 675.626